New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 668061 =29 (0.550)3 (0.070) 3/198 NT 8.9% intergenic (+22/+130) yfhM/PP_0571 lipoprotein/membrane protein
?NC_002947 668178 = 38 (0.900)intergenic (+139/+13) yfhM/PP_0571 lipoprotein/membrane protein

TGTACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTC  >  NC_002947/667912‑668209
                                                                                                                                                     |                                                                                                                                                    
tGTACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGT                                                                                                                                                      >  1:378539‑M1/1‑150 (MQ=255)
 ctgagcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttg                                                                                                                                                     >  2:886382‑M1/149‑150 (MQ=255)
  tACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGT                                                                                                                                                    <  1:935973‑M1/150‑1 (MQ=255)
  tACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGT                                                                                                                                                    <  1:1326815‑M1/150‑1 (MQ=255)
   gagcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgagcattcattcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgtg                                                                                                                                                   <  1:1243632‑M1/4‑1 (MQ=255)
   aCCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTG                                                                                                                                                   <  1:706925‑M1/150‑1 (MQ=255)
   aCCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTG                                                                                                                                                   <  1:715251‑M1/150‑1 (MQ=255)
    agcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctgggtctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTgg                                                                                                                                                  >  1:1393504‑M1/146‑150 (MQ=255)
        gcgcGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGC                                                                                                                                              <  1:783195‑M1/150‑1 (MQ=255)
           tggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGc                                                                                                                                           >  2:690426‑M1/139‑150 (MQ=255)
           cgAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCCGGTAGAACCCATGTCCCAGCCGAACCTGCAGGCCGTGGTCGATGGGCAAGGGGATATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGC                                                                                                                                           <  2:1229348‑M1/150‑1 (MQ=255)
             aGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCT                                                                                                                                         >  2:1316030‑M1/1‑150 (MQ=255)
              ccctgatcatcggcctgatgctgctggactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCtt                                                                                                                                        >  2:323500‑M1/136‑150 (MQ=255)
                ctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGc                                                                                                                                      <  2:1088873‑M1/17‑1 (MQ=255)
                aGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGC                                                                                                                                      <  2:440270‑M1/150‑1 (MQ=255)
                     ccccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGC                                                                                                                                 >  2:1359502‑M1/1‑150 (MQ=255)
                     ccccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGC                                                                                                                                 <  2:1247380‑M1/150‑1 (MQ=255)
                      cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCG                                                                                                                                >  1:843185‑M1/1‑150 (MQ=255)
                       tcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGa                                                                                                                               <  2:1263176‑M1/24‑1 (MQ=255)
                       ccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA                                                                                                                               <  2:378539‑M1/150‑1 (MQ=255)
                        cGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAt                                                                                                                              >  1:1166807/1‑150 (MQ=255)
                               cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCg                                                                                                                       >  1:1088873/1‑150 (MQ=255)
                                tACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGc                                                                                                                      >  1:257293/1‑150 (MQ=255)
                                       tGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCgg                                                                                                               <  2:41106/150‑1 (MQ=255)
                                        gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc                                                                                                              <  1:315329/150‑1 (MQ=255)
                                         ccgccgccgCAGGTCGAATAGATGTAACGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGATACCCGCTCTACGCGGATATTGTGGAAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGcc                                                                                                             <  1:1316030/150‑1 (MQ=255)
                                                 gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAt                                                                                                     >  1:1141307/1‑150 (MQ=255)
                                                    ggTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG                                                                                                                                  <  1:526893‑M1/118‑1 (MQ=255)
                                                    ggTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG                                                                                                                                  >  2:526893‑M1/1‑118 (MQ=255)
                                                    ggTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG                                                                                                                                  >  2:526798‑M1/1‑118 (MQ=255)
                                                    ggTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG                                                                                                                                  <  1:526798‑M1/118‑1 (MQ=255)
                                                         aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGACACCCGCTCTACGCGGAAAGTGTGGCAGCGCCCTTGCGTCGCGATAGGGCCGCACAGCGGCCCCGACATTTCAAgcgg                                                                                             >  2:141600/1‑150 (MQ=255)
                                                          aTCGATGTACAGGCCGAACCTGCAGGCTGTGGGCGATGGGCAAGGTGATATGACTGTGAAAGCCCGCTAGAGACCCGCTCTAAGCGGCCAGTGTGGGAGCCGCCTTGCGGCGGGAAAGGGCGTCGGAGCGGCTGCGACAATTCAAgcggc                                                                                            <  2:728303/150‑1 (MQ=255)
                                                              aTGTACCGGCCGAACTTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg                                                                                        <  2:993762/150‑1 (MQ=255)
                                                                    cGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa                                                                                  <  2:678781/150‑1 (MQ=255)
                                                                         tctccTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg                                                                             <  2:50021/147‑1 (MQ=255)
                                                                             gctcAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTggaga                                                                         >  1:50021/4‑147 (MQ=255)
                                                                             cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggc                                                                         >  1:984119‑M1/1‑96 (MQ=255)
                                                                               gCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctg                                                                       >  2:883806/1‑150 (MQ=255)
                                                                                cAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCCACCGGCGAAGCTGAAAGCCTGGGgctgc                                                                      <  1:193640/150‑1 (MQ=255)
                                                                                 cggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct                                                                     >  1:929311‑M1/69‑150 (MQ=255)
                                                                                   gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGTTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgt                                                                   <  1:1021895/150‑1 (MQ=255)
                                                                                      gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa                                                                <  1:272612/150‑1 (MQ=255)
                                                                                      gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa                                                                >  2:964837/1‑150 (MQ=255)
                                                                                        gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggc                                                              <  2:984119‑M1/150‑66 (MQ=255)
                                                                                           cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg                                                                                                                >  1:295099/1‑97 (MQ=255)
                                                                                           cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg                                                                                                                <  2:295099/97‑1 (MQ=255)
                                                                                                 gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc                                                        >  2:1272144‑M1/1‑76 (MQ=255)
                                                                                                 gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc                                                        <  1:1272144‑M1/147‑72 (MQ=255)
                                                                                                  gaagGGGAGATGACGGTGAGAGCCCGGTAGAGAGCCGCTCTACGCGGAAAGTGTGGGAGGGGCCTGGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga                                                    >  2:257293‑M2/2‑144 (MQ=255)
                                                                                                       ggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa                                               >  1:1359502‑M2/1‑139 (MQ=255)
                                                                                                        gagaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGA                                                                                                                                                >  1:427674‑M1/1‑52 (MQ=255)
                                                                                                        gagaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGA                                                                                                                                                <  2:427674‑M1/52‑1 (MQ=255)
                                                                                                                  gatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCca                                    <  1:464839‑M1/115‑1 (MQ=255)
                                                                                                                     aaGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaa                                 >  2:1243632/1‑150 (MQ=255)
                                                                                                                      agctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaaa                                >  2:464839‑M1/32‑150 (MQ=255)
                                                                                                                      aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGCACGCCCAGCCGCAGCTTCAAGTCAAGCGGCAAATTTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaaa                                <  1:883806/150‑1 (MQ=37)
                                                                                                                         ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc                             <  2:554719/150‑1 (MQ=255)
                                                                                                                          cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                            >  1:1222146/1‑150 (MQ=255)
                                                                                                                          cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                            >  2:290004/1‑150 (MQ=255)
                                                                                                                            cTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACcgc                          <  2:1141307/150‑1 (MQ=255)
                                                                                                                                  aCCCGCTCTACGCGGAAAGTGTGGGAGCGGACTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGAt                    >  1:983530/1‑150 (MQ=255)
                                                                                                                                     cGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGCCCGCGCAGagcgg                 >  1:1269192/1‑146 (MQ=255)
                                                                                                                                            cgcgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGGCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCa          >  2:112267/1‑150 (MQ=255)
                                                                                                                                                gAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCa      >  1:1277315/1‑150 (MQ=255)
                                                                                                                                                    gtgtGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa                                                                <  1:733149/88‑1 (MQ=255)
                                                                                                                                                    gtgtGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa                                                                >  2:733149/1‑88 (MQ=255)
                                                                                                                                                    gtgtGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtc  <  2:1166807/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TGTACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTC  >  NC_002947/667912‑668209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.