| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 706880 | 46 (0.880) | 3 (0.070) | 3/214 | NT | 7.2% | intergenic (+53/+193) | PP_0599/rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 |
| ? | NC_002947 | = 706965 | 37 (0.810) | intergenic (+138/+108) | PP_0599/rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 | |||||
ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/706718‑706880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTTGG < NC_002947/706965‑706820 ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT < 1:482005/150‑1 GATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTAGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCC > 1:27672/1‑150 TGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTT < 2:1274794/150‑1 GGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG < 1:1030637/150‑1 CCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT > 1:81479/1‑141 CCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT < 2:81479/141‑1 GCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGC > 1:414485/1‑150 GCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAA < 2:414485/150‑1 TGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGTGACGCAAGGCCGCTCC < 1:1373739/150‑1 GGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTgct > 1:1309223/1‑147 GGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACT > 1:672824/1‑150 CTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTTGG < 1:86916/150‑1 ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/706718‑706880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTTGG < NC_002947/706965‑706820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |