New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 832322	53 (1.010)	6 (0.120)	6/232	NT	10.8%	coding (82/1098 nt)	PP_0716	HlyD family secretion protein
	?	NC_002947	= 832338	49 (0.990)					coding (98/1098 nt)	PP_0716	HlyD family secretion protein

CAACGCACCGACTGGGGCGAGTTGCTCGACGAGCCAGCCCCCACCGCGCATGCACAAGGTGAAACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/832173‑832322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagccAGCAAGTACCAGAGCAGGCTGACGGCAATCAGCAGCAGCACCCAGCGTATGCCGCGATCCGGGGCTGATGGGGGCGGCGTTGGCGTGGCGTCGCTCATTCGGTTTCACCTTGTGCATGCGCGGTGGGGGCTGGCTCGTCGAGC  <  NC_002947/832338‑832196                                                                                                                                                                                                                                                                                                       CAACGCACCGACTGGGGCGAGTTGCTCGACGAGCCAGCCCCCACCGCGCATGCACAAGGTGAAACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCC                                                                                                                                                 >  1:998183/1‑150                     GTTGCTCGACGAGCCAGCCCCCACCGCGCATGCACAAGGTGAAACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCCAGCAAGTACCAGAGCAGGCT                                                                                                                             >  2:1381377/1‑150                       TGCTCGACGAGCCAGCCCCCACCGCGCATGCACAAGGTGAAACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCCAGCAAGTACCAGAGCAGGCTGA                                                                                                                           <  1:1381377/150‑1                                                                ACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGCCAGCCAGCAAGTACCAGAGCAGGCTGAC                                                                                                                          >  1:684707/1‑110                                                                ACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGCCAGCCAGCAAGTACCAGAGCAGGCTGAC                                                                                                                          <  2:684707/110‑1                                                                                             CCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCCAGCAAGTACCAGAGCAGGCTGACGGCAATCAGC                                                                                                                >  1:348285/1‑91                                                                                             CCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCCAGCAAGTACCAGAGCAGGCTGACGGCAATCAGC                                                                                                                <  2:348285/91‑1                                                                                                                                                GTCAGCCAGCAAGTACCAGAGCAGGCTGACGGCAATCAGCAGCAGCACCCAGCGTATGCCGCGATCCGGGGCTGATGGGGGCGGCGTTGGCGTGGCGTCGCTCATTCGGTTTCACCTTGTGCATGCGCGGTGGGGGCTGGCTCGTCGAGC  <  1:1231217/150‑1                                                                                                                                                      CAGCAAGTACCAGAGCAGGCTGACGGCAATCAGCAGCAGCACCCAGCGTATGCCGCGATCCGGG                                                                                  <  1:174339/64‑1                                                                                                                                                      CAGCAAGTACCAGAGCAGGCTGACGGCAATCAGCAGCAGCACCCAGCGTATGCCGCGATCCGGG                                                                                  >  2:174339/1‑64                                                                                                                                                                                                                                                                                                       CAACGCACCGACTGGGGCGAGTTGCTCGACGAGCCAGCCCCCACCGCGCATGCACAAGGTGAAACCGAATGAGCGACGCCACGCCAACGCCGCCCCCATCAGCCCCGGATCGCGGCATACGCTGGGTGCTGCTGCTGATTGCCGTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/832173‑832322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagccAGCAAGTACCAGAGCAGGCTGACGGCAATCAGCAGCAGCACCCAGCGTATGCCGCGATCCGGGGCTGATGGGGGCGGCGTTGGCGTGGCGTCGCTCATTCGGTTTCACCTTGTGCATGCGCGGTGGGGGCTGGCTCGTCGAGC  <  NC_002947/832338‑832196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.