| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 929163 | 73 (1.390) | 5 (0.100) | 5/240 | NT | 6.6% | coding (16462/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | = 929197 | 70 (1.370) | coding (16428/18933 nt) | PP_0806 | surface adhesion protein | |||||
GGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/929017‑929163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagCACGGTCACCGTGCGCAACAGCGCCGGTACCGTACTGGGTACCGCAACGGTGGGCAGCAACGGCCTGTTCGTGGTCAGCCTGACTGCGGCGCAGATCGACAACCAGGCGCTCAGCGTCACCCTCACCGACAGCGCCGGTAATGTGTC < NC_002947/929197‑929051 GGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGATGTCGGTGAGGGTGACGCTGAGCGCGTGGTTATCGAACTGCGCCGCAGTCAGGCTTACCCCGAACAGGCCGTTGCTGACCACCGTTTCGCTACCCAGCAa > 1:598130/1‑149 TCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCA > 1:1067893/1‑144 TCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCA < 2:1067893/144‑1 AGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACACAGCACGGTC > 2:368192/1‑150 GACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAGCACGGTCACCGTGCGCAACAGCGCCGGTACCGTACTG < 1:368192/150‑1 CACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAGCACGGTCACCGTGCGCAACAGCGCCGGTACCGTACTGGG < 1:1214450/150‑1 GTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCA < 1:1270617/91‑1 GTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCA > 2:1270617/1‑91 GAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAGCACGGTCACCGTGCGCAACAGCGCCGGTACC < 1:1076002/109‑1 GAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAGCACGGTCACCGTGCGCAACAGCGCCGGTACC > 2:1076002/1‑109 CAGCACGGTCACCGTGCGCAACAGCGCCGGTACCGTACTGGGTACCGCAACGGTGGGCAGCAACGGCCTGTTCGTGGTCAGCCTGACTGCGGCGCAGATCGACAACCAGGCGCTCAGCGTCACCCTCACCGACAGCGCCGGTAATGTGTC < 2:325828/150‑1 CAGCACGGTCACCGCGCGCAACAGCGCCGGTACCGTACTGGGTACCGCAACGGTGGGCAGCAACGGCCTGTTCGTGGTCAGCCTGACTGCGGCGCAGATCGACAACCAGGCGCTCAGCGTCACCCTCACCGACAGCGCCGGTAATGTGTC < 2:436581/150‑1 GGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGCGCCTGGTTGTCGATCTGCGCCGCAGTCAGGCTGACCACGAACAGGCCGTTGCTGCCCACCGTTGCGGTACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/929017‑929163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagCACGGTCACCGTGCGCAACAGCGCCGGTACCGTACTGGGTACCGCAACGGTGGGCAGCAACGGCCTGTTCGTGGTCAGCCTGACTGCGGCGCAGATCGACAACCAGGCGCTCAGCGTCACCCTCACCGACAGCGCCGGTAATGTGTC < NC_002947/929197‑929051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |