| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1029045 = | 56 (1.070) | 4 (0.080) | 3/232 | NT | 7.5% | intergenic (‑303/+78) | dppA‑III/PP_0886 | dipeptide ABC transporter substrate‑binding protein/hypothetical protein |
| ? | NC_002947 | 1029098 = | 46 (0.930) | intergenic (‑356/+25) | dppA‑III/PP_0886 | dipeptide ABC transporter substrate‑binding protein/hypothetical protein | |||||
GCGCCAGATATCGAGGCAGGCACCAGTGAAGTGAGCATGAATGCCGATGGCCTGATCGAAGTGCAGATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1029197‑1029045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGCGCCGGTGCTGCTTCATCAGCCCCCATGGCCTTCATCGCCATCGGCGC > NC_002947/1029098‑1029242 GCGCCAGATATCGAGGCAGGCACCAGTGAAGTGAGCATGAATGCCGATGGCCTGATCGAAGTGCAGATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGC < 1:581803/150‑1GCGCCAGATATCGAGGCAGGCACCAGTGAAGTGAGCATGAATGCCGATGGCCTGATCGAAGTGCAGATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGC < 2:1043108/150‑1 GCCAGATATCGAGGCAGGCACCAGTGAAGTGAGCATGAATGCCGATGGCCTGATCGAAGTGCAGATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGG < 1:149013/150‑1 GATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGG < 1:1398943/87‑1 GATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGG > 2:1398943/1‑87 GTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG < 1:194060/75‑1 GTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG > 2:194060/1‑75 ACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGT > 2:1296900/1‑150 CCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGC > 1:734758/1‑150 CCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGC > 2:491139/1‑150 AGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGCGCCGGTGCT < 2:734758/150‑1 GCGGGCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGACCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGCGCCGGTGCTGCTTCATCAGCCCCCATGGCCTTCATCGCCATCGGCGC > 1:45896/1‑150 GCGCCAGATATCGAGGCAGGCACCAGTGAAGTGAGCATGAATGCCGATGGCCTGATCGAAGTGCAGATGCCATAAGGCGTCCACGCATCATCTGTGGGAGCCCGCGAGCAAGACACGGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1029197‑1029045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggCTCCCACAGATGATGCGTGGACGCCTTATGGCATCTGCACTTCGATCAGGCCATCGGCATTCATGCTCACTTCACTGGTGCCTGCCTCGATATCTGGCGCCGGTGCTGCTTCATCAGCCCCCATGGCCTTCATCGCCATCGGCGC > NC_002947/1029098‑1029242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |