| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1128317 | 63 (1.200) | 4 (0.080) | 4/234 | NT | 6.2% | coding (1240/2856 nt) | gcvP‑I | glycine dehydrogenase |
| ? | NC_002947 | = 1128332 | 61 (1.220) | coding (1225/2856 nt) | gcvP‑I | glycine dehydrogenase | |||||
GCGCAGCAGGGCGGCAGGCAGCAGGGAACCGGTGCTGGCGGCCAGTGCGGTGAAATCAGGCTGTGCCTGCTCGCCACCCAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1128165‑1128317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGGGTGGCGAGCAGGCACAGCCTGATTTCACCGCACTGGCCGCCAGCACCGGTTCCCTG < NC_002947/1128332‑1128186 GCGCAGCAGGGCGGCAGGCAGCAGGGAACCGGTGCTGGCGGCCAGTGCGGTGAAATCAGGCTGTGCCTGCTCGCCACCCAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGC > 2:1072573/1‑150GCGCAGCAGGGCGGCAGGCAGCAGGGAACCGGTGCTGGCGGCCAGTGCGGTGAAATCAGGCTGTGCCTGCTCGCCACCCAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGAGCTGGTGTCGTCCAGAGACAGGCCCACATGGGCGGC > 2:335814/1‑150 CAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATCAACCTGCGCCAGATCGATGCCtc > 2:1229014/1‑96 CAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATCAACCTGCGCCAGATCGATGCCGC < 1:1229014/98‑1 GCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATCAACCTGCGCCAGATCGAT > 1:1161899/1‑79 GCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATCAACCTGCGCCAGATCGAT < 2:1161899/79‑1 GGCATCAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGGGTGGCGAGCAGGCACAGCCTGATTTCACCGCACTGGCCGCCAGCACCGGTTCC < 1:1149878/150‑1 GGCATCAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGG > 1:703733/1‑97 GGCATCAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGG < 2:703733/97‑1 GCATCAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGGGTGGCGAGCAGGCACAGCCTGATTTCACCGCACTGGCCGCCAGCACCGGTTCCC < 2:711922/150‑1 ATCAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGGGTGGCGAGCAGGCACAGCCTGATTTCACCGCACTGGCCGCCAGCACCGGTTCCCTG > 1:563689/1‑150 GCGCAGCAGGGCGGCAGGCAGCAGGGAACCGGTGCTGGCGGCCAGTGCGGTGAAATCAGGCTGTGCCTGCTCGCCACCCAACAGCTGCCACAGCGACTCGACGTCAGCCTGAGTGCTGGTTTCGTCCAGAGACAGGCCCACATGGGCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1128165‑1128317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcAACCTGCGCCAGATCGATGCCGCCCATGTGGGCCTGTCTCTGGACGAAACCAGCACTCAGGCTGACGTCGAGTCGCTGTGGCAGCTGTTGGGTGGCGAGCAGGCACAGCCTGATTTCACCGCACTGGCCGCCAGCACCGGTTCCCTG < NC_002947/1128332‑1128186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |