New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1364735 = | 51 (0.970) | 3 (0.060) | 3/240 | NT | 6.2% | intergenic (+99/+50) | dctA‑I/PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
? | NC_002947 | 1364793 = | 41 (0.800) | coding (691/699 nt) | PP_1189 | hypothetical protein |
GCTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1364789‑1364735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaGTACCACTTCCAACACCCGGATGACGTCCGGCTGCGGGTAATGCCACCTTACTTGCACATCCCAGAACTTCACCCCGTACACCCGCTCGGACGGT > NC_002947/1364793‑1364887 GCTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGTCCAGTACCACTTCCAACACCCGGATGACGTCCGGCTGCGGGTAATGCCACCTTACTTGCACATCCCAGAACTTCACCCCGTACACCCGCTCGGACGGT > 1:920873/1‑150 CTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGTCCAGTACCACTTCCAACACCCGGATGACGTCCGGCTGCGGGTAATGCCAC > 1:1288996/1‑101 CTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGTCCAGTACCACTTCCAACACCCGGATGACGTCCGGCTGCGGGTAATGCCAC < 2:1288996/101‑1 GCTGAGGGCCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1364789‑1364735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaGTACCACTTCCAACACCCGGATGACGTCCGGCTGCGGGTAATGCCACCTTACTTGCACATCCCAGAACTTCACCCCGTACACCCGCTCGGACGGT > NC_002947/1364793‑1364887 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |