New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1455740 | 58 (1.100) | 5 (0.100) | 5/232 | NT | 8.5% | coding (1267/1455 nt) | PP_1273 | multidrug MFS transporter outer membrane protein |
? | NC_002947 | = 1455758 | 53 (1.070) | coding (1285/1455 nt) | PP_1273 | multidrug MFS transporter outer membrane protein |
GCAACAGCAGGAAGCCGCGCTGAACTATCGCAAGGTGGTGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1455586‑1455740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcccCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTGCGATAG < NC_002947/1455758‑1455610 GCAACAGCAGGAAGCCGCGCTGAACTATCGCAAGGTGGTGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAAC > 2:386856/1‑150 TCGCAAGGTGGTGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCCCTTCCACATACTGGCGCTGGGC > 2:1264776/1‑150 AAGGTGGTGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCCCTTCCACATACTGGCGCTGGGCGGTT < 1:1264776/150‑1 TGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGG < 2:146379/150‑1 CTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTC > 1:1181566/1‑146 CTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTC < 2:1181566/146‑1 ACCGCCCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTG > 2:28107/1‑150 ACCGCCCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTG < 2:618705/150‑1 ACCGCCCCTTCCACAGACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCAAGGCCTCGCCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTG > 1:996988/1‑150 GCCCCTTCCACCTACTGCCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTGCGA < 2:1143734/150‑1 CCCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTGCGATA > 2:1344884/1‑150 CCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTGCGATAG < 1:1425861/150‑1 GCAACAGCAGGAAGCCGCGCTGAACTATCGCAAGGTGGTGCTGGGGGCCTGGCATGAAATTGACGATGTGCTACGCCTGTACAACGCCAGTCAGTTGCGCCGTGATCACCTTGCCGAGGCCGTGCGGCAAAACCGAATCGCCCTGGAAACCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1455586‑1455740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcccCTTCCACATACTGGCGCTGGGCGGTTTCCAGGGCGATTCGGTTTTGCCGCACGGCCTCGGCAAGGTGATCACGGCGCAACTGACTGGCGTTGTACAGGCGTAGCACATCGTCAATTTCATGCCAGGCCCCCAGCACCACCTTGCGATAG < NC_002947/1455758‑1455610 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |