| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1561261 | 61 (1.160) | 4 (0.080) | 4/236 | NT | 6.5% | coding (872/1875 nt) | pctA | methyl‑accepting chemotaxis protein PctA |
| ? | NC_002947 | = 1561282 | 56 (1.110) | coding (851/1875 nt) | pctA | methyl‑accepting chemotaxis protein PctA | |||||
TGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1561109‑1561261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaTCATCGGCCTGCTCGGCCTGCTGATCCGCGTGTTGATGCAACCGCTGCACACCATGACCCGCGCCATGGAAGACATCGCCGAAGGTGAGGGCGACCTGACCAAGCGCCTGCACATCCACAGCCACGACGAATTCGGTGTCCTCGGCAAC < NC_002947/1561282‑1561134 TGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGA < 1:1221961/150‑1 GCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGAT > 2:1327149/1‑150 CCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCATCATCGGCCTGCTCGGCCTGCTGATC < 2:1209368/150‑1 ACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCGACACGCGGATCATCATCGGCCTGCTCGGCCTGCTGATCCGCGTGTT < 1:847314/150‑1 GCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCATCATCGGCCTGCTCGGCCTGCT > 1:48009/1‑108 GCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCATCATCGGCCTGCTCGGCCTGCT < 2:48009/108‑1 ATCATCGGCCTGCTCGGCCTGCTGATCCGCGTGTTGATGCAACCGCTGCACACCATGACCCGCGCCATGGAAGACATCGCCGAAGGTGAGGGCGACCTGACCAAGCGCCTGCACATCCACAGCCACGACGAATTCGGTGTCCTCGGCAAC > 1:498279/1‑150 TGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1561109‑1561261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaTCATCGGCCTGCTCGGCCTGCTGATCCGCGTGTTGATGCAACCGCTGCACACCATGACCCGCGCCATGGAAGACATCGCCGAAGGTGAGGGCGACCTGACCAAGCGCCTGCACATCCACAGCCACGACGAATTCGGTGTCCTCGGCAAC < NC_002947/1561282‑1561134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |