New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1561261	61 (1.160)	4 (0.080)	4/236	NT	6.5%	coding (872/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA
	?	NC_002947	= 1561282	56 (1.110)					coding (851/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA

GTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAGGTCAGCAGGCGGGTC  >  NC_002947/1561134‑1561431                                                                                                                                                     |                                                                                                                                                      gTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGAt                                                                                                                                                      >  1:498279‑M2/1‑149 (MQ=255)         ggACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATcacca                                                                                                                                              <  2:1292000/150‑1 (MQ=255)            cacCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGCGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTg                                                                                                                                           <  2:596122/150‑1 (MQ=255)             acCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGc                                                                                                                                          >  1:1128571/1‑150 (MQ=255)             acCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGc                                                                                                                                          >  1:695127/1‑150 (MQ=255)              ccGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGcc                                                                                                                                         >  2:712323/1‑150 (MQ=255)              ccGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTATTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGcc                                                                                                                                         >  1:369569/1‑150 (MQ=255)                  aTTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTa                                                                                                                                     <  1:712323/150‑1 (MQ=255)                      gtcgtGGCTGTGGATGTGCAGGTGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTTATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGt                                                                                                                                 <  2:409364/150‑1 (MQ=255)                             cTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGc                                                                                                                              <  2:522884/146‑1 (MQ=255)                             cTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGc                                                                                                                              >  1:522884/1‑146 (MQ=255)                              tgtgGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACCCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGACCa                                                                                                                         >  2:321992/1‑150 (MQ=255)                                      tgCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCagag                                                                                                                 <  1:1201426/150‑1 (MQ=255)                                        cAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGt                                                                                                               <  1:1079952/150‑1 (MQ=255)                                             gcTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGa                                                                                                          <  2:224329/150‑1 (MQ=255)                                              cTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGaa                                                                                                         <  2:597846/150‑1 (MQ=255)                                                tGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAgg                                                                                                       <  1:184742/150‑1 (MQ=255)                                                 ggTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGCTCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGt                                                                                                      <  2:695127/150‑1 (MQ=255)                                                       gTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAg                                                                                                >  2:402507/1‑150 (MQ=255)                                                           cccTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGTATCAGCAGGCCCTCCAGGACGATCTTGATCACCAGCAGGACGAGCCTTGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATc                                                                                            <  1:387336/150‑1 (MQ=255)                                                           cccTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATc                                                                                            <  2:935696/150‑1 (MQ=255)                                                           cccTCACCTTCGGCGATGTATTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATc                                                                                            <  2:369569/150‑1 (MQ=255)                                                            ccTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCg                                                                                           >  2:723747/1‑150 (MQ=255)                                                            ccTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCg                                                                                           >  1:211218/1‑150 (MQ=255)                                                                 ccTTTGGCGATGTCTTCCATGGCGCGCGTCATGGTGTGCAGCGGTTGCATCAACCCGCGGCTCAGCAAGCCGAGCACGCCGATGATGATTACCACCGCCACTACCGTCGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGCGAAg                                                                                      <  2:712608/150‑1 (MQ=255)                                                                  cTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAgg                                                                                     >  2:142952/1‑150 (MQ=255)                                                                         gATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGTTGCTGAGCATCGAGAAGGccttgtc                                                                              <  2:874071/150‑1 (MQ=255)                                                                           tGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAATGctttgcctt                                                                            <  2:1380635/150‑5 (MQ=255)                                                                               ttCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCcttgtccttgtc                                                                        >  2:1011661/1‑150 (MQ=255)                                                                                 ccATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCa                                                                      >  2:1361970/1‑150 (MQ=255)                                                                                     ggCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGa                                                                  <  1:402507/150‑1 (MQ=255)                                                                                        gcgGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAgg                                                                                     >  2:892680/1‑128 (MQ=255)                                                                                        gcgGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAgg                                                                                     <  1:892680/128‑1 (MQ=255)                                                                                            gTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGaa                                                                                                         <  2:544035/104‑1 (MQ=255)                                                                                            gTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGaa                                                                                                         >  1:544035/1‑104 (MQ=255)                                                                                             tCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTgg                                                                                                                               >  1:1050969/1‑81 (MQ=255)                                                                                             tCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTgg                                                                                                                               <  2:1050969/81‑1 (MQ=255)                                                                                                tGGAGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTCCGGAAGGTGCTGAGCATCGAGAACGCCTTGTCCTTGTCCACCGACAGGCCGATGt                                                       >  2:254284/1‑150 (MQ=255)                                                                                                   tgtgCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGccttgtcc                                                                             <  2:1357274/125‑1 (MQ=255)                                                                                                   tgtgCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGccttgtcc                                                                             >  1:1357274/1‑125 (MQ=255)                                                                                                            gTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCg                                           >  1:1035346/1‑150 (MQ=255)                                                                                                                 aTCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGc                                      >  2:978179/1‑150 (MQ=255)                                                                                                                  tCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCa                                     >  2:869868/1‑150 (MQ=255)                                                                                                                    aaCACGCGGATCAGCAGGCCGAGCAGGCCGATGAtgatccgcgtgtcgatgcaaccgctgcacaccatgacccgcgccatggaagacatcgccgaaggtgagggcgacctgaccaagcgcctgcacatccacagccacgacgaattcggt                                   <  1:847314‑M2/150‑117 (MQ=255)                                                                                                                     acacGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGc                                  <  2:211218/150‑1 (MQ=255)                                                                                                                       acGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGccttgtcc                                                                             >  2:187829/1‑105 (MQ=255)                                                                                                                       acGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGccttgtcc                                                                             <  1:187829/105‑1 (MQ=255)                                                                                                                       acGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCCGTTCGCCGACGGCAGGCCg                                >  2:213063/1‑150 (MQ=255)                                                                                                                           ggATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTaa                            <  1:929022/150‑1 (MQ=255)                                                                                                                           ggATCAACAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTaa                            >  2:414565/1‑150 (MQ=255)                                                                                                                            gATCAGCAGGCCGAGCAGGCCGATGAtgatccgcgtgttgatgcaaccgctgcacaccatgacccgcgccatggaagacatcgccgaaggtgagggcgacctgaccaagcgcctgcacatccacagccacgacgaattcggtgtcctcgg                           <  2:1209368‑M2/150‑125 (MQ=255)                                                                                                                              tCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCg                         <  2:396008/150‑1 (MQ=255)                                                                                                                                agcaggccgagcaggccgATGAtgatccgcgtgttgatgcaaccgctgcacaccatgacccgcgccatggaagacatcgccgaaggtgagggcgacctgaccaagcgc                                                                 <  2:48009‑M2/108‑87 (MQ=255)                                                                                                                                agcaggccgagcaggccgATGAtgatccgcgtgttgatgcaaccgctgcacaccatgacccgcgccatggaagacatcgccgaaggtgagggcgacctgaccaagcgc                                                                 >  1:48009‑M2/1‑22 (MQ=255)                                                                                                                                 gcaggccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCCCCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCGTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTCATCGGGc                      >  2:411551/1‑150 (MQ=255)                                                                                                                                 gcaggccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAg                                                                                      >  2:1030319/1‑86 (MQ=255)                                                                                                                                 gcaggccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAg                                                                                      <  1:1030319/86‑1 (MQ=255)                                                                                                                                    ggccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGa                   <  2:1128571/150‑1 (MQ=255)                                                                                                                                     gccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGaa                  >  1:465876/1‑150 (MQ=255)                                                                                                                                     gccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGaa                  <  1:869868/150‑1 (MQ=255)                                                                                                                                      ccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAg                 <  1:155545/150‑1 (MQ=255)                                                                                                                                      ccgagcaggccgaTGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAg                 <  2:465876/150‑1 (MQ=255)                                                                                                                                                  atgatgatCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAGGTCAGCAGGCgg     <  1:1361970/150‑1 (MQ=255)                                                                                                                                                     atgatCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAGGTCAGCAGGCGGGTc  >  1:892103/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCGCGGGTCATGGTGTGCAGCGGTTGCATCAACACGCGGATCAGCAGGCCGAGCAGGCCGATGATGATCACCACTGCCACTACCGTGGCGATCACCGCAGAGGTGCGGAAGGTGCTGAGCATCGAGAAGGCCTTGTCCTTGTCCACCGACAGGCCGATGTACCAGTTCGCCGACGGCAGGCCGGTAATCGGGCTGAAGGTCAGCAGGCGGGTC  >  NC_002947/1561134‑1561431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.