New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1650443 = | 48 (0.910) | 3 (0.060) | 3/232 | NT | 5.4% | coding (659/2043 nt) | PP_1446 | TonB‑dependent receptor |
? | NC_002947 | 1650490 = | 59 (1.190) | coding (612/2043 nt) | PP_1446 | TonB‑dependent receptor |
GCGCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1650593‑1650443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC > NC_002947/1650490‑1650637 GCGCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCG > 2:832731/1‑150 CGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCA < 1:837814/80‑1 CGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCA > 2:837814/1‑80 GCTAGGCAGGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGATGTTAGCATCCAGGTGCAGGGCGAAGGCGCCGTAGCCGGGCTGCATCTTGCCTGCGCTGCTGCGGGTGGTGTCGGCGCCGg > 2:75877/1‑149 GGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC < 2:958329/150‑1 GCGCCGACACCACTCGCAGCAGCGCCGGCAAGCTGGAGGCCGGCGACGGCGCCTTCGCCCTGCACCTGGATGCCAACAGCCGCCAGTTCAACGACCTGCGCATCCCGGGCTATGCACGCAGCGCCAAGGTGCGCGATGCCGACGAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1650593‑1650443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccggGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGCGCCGCCGTAACGCAGTTCACCGGCACCGTGGATGCCCTCGATCGGC > NC_002947/1650490‑1650637 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |