New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1650443 = | 48 (0.910) | 3 (0.060) | 3/232 | NT | 5.4% | coding (659/2043 nt) | PP_1446 | TonB‑dependent receptor |
? | NC_002947 | 1650490 = | 59 (1.190) | coding (612/2043 nt) | PP_1446 | TonB‑dependent receptor |
CAGGCGCACGCCGGACTCGGCCACCGAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGC > NC_002947/1650295‑1650591 | gccgatcgagggcatccacggtgccggtgaactgcgttacggcggcgccgacaccactcgcagcagcgccggcaagctggaggccggcgacggcgccttcgccctgcacctggatgccaacagccgccagttcaacgacctgcgcatccc < 2:958329‑M1/2‑1 (MQ=255) cAGGCGCACGCCGGACTCGGCCACCGAGCCGCAGATGATCTTGCATCCATCCGACCACAGGCCGGCGTAGTCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGGCGCTGTTTTCCAGGCGGTGTTTGCTGcc > 1:958329/1‑150 (MQ=255) aGGCGCACGCCGGACTCGGCCACCGAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCg > 2:151408/1‑150 (MQ=255) ggCCACCGAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCAAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCATGCGGTTTTTGCTGCCGGGCTCGTCGGCATcgcg > 2:1366750/1‑150 (MQ=255) ccACTGAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGGTTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGACTGTTTGGGCTGCCGGTCGCGTCGGCATCGCGCa > 1:287774/1‑150 (MQ=255) gAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTg > 1:1148146/1‑150 (MQ=255) ttGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGt < 1:654879/150‑1 (MQ=255) tGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGt < 1:123819/146‑1 (MQ=255) tGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGt > 2:123819/1‑146 (MQ=255) tCGTAGCGGCTGTACGCCAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATcgcg < 1:495571/128‑1 (MQ=255) tCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATcgcg > 2:495571/1‑128 (MQ=255) ccggcgccgacaccacccgcagcagcgcaggcaagatgcagcccggctacggcgccttcgccctgcacctggatgctaacatccgccagttcaacgacctgcgcatcCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCCTGCCTAGc > 2:75877‑M1/108‑150 (MQ=255) aGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCg > 2:90601/1‑150 (MQ=255) gCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCg < 1:1011511/106‑1 (MQ=255) gCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCg > 2:1011511/1‑106 (MQ=255) gCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGt < 2:568571/136‑1 (MQ=255) gCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGt > 1:568571/1‑136 (MQ=255) gCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGAt > 1:1421522/1‑150 (MQ=255) cTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATg < 1:90601/150‑1 (MQ=255) aCGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCa > 2:606256/1‑150 (MQ=255) gACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAgg > 1:74681/1‑150 (MQ=255) cGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGa < 1:1358791/150‑1 (MQ=255) cGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATCGCCCGGGATGCGCAGGTCGTTGAACTggcggc > 1:543957/1‑150 (MQ=255) tCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTg < 1:922054/150‑1 (MQ=255) cccAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTgg < 2:113452/150‑1 (MQ=255) ccAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGc > 1:790144/1‑150 (MQ=255) ccAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGc > 1:43971/1‑150 (MQ=255) cAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATTGCACTGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCa > 1:1143028/1‑150 (MQ=255) aGTGGTAGGCACCGCCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCAt < 2:722412/150‑1 (MQ=255) caccGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAggg < 2:109462/150‑1 (MQ=255) gttGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAg < 2:74681/149‑1 (MQ=255) aTTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAg > 1:832731/1‑150 (MQ=255) cgccgTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATgcgc > 2:433155/1‑98 (MQ=255) cgccgTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATgcgc < 1:433155/98‑1 (MQ=255) tCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTTGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCg > 2:492871/1‑150 (MQ=255) tCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCg > 2:1031540/1‑150 (MQ=255) cTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAAGTAGCGCCTGTTGGCACCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGc > 2:311558/1‑150 (MQ=255) tgacGACCGTTGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGcc > 2:1096322/4‑150 (MQ=255) tGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGcc > 2:1107859/1‑150 (MQ=255) tgccaacagccgccagttcaacgacctgcgcatcCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCg < 1:837814‑M1/46‑1 (MQ=255) tgccaacagccgccagttcaacgacctgcgcatcCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCg > 2:837814‑M1/35‑80 (MQ=255) cGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAg < 2:1373369/121‑1 (MQ=255) cGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAg > 1:1373369/1‑121 (MQ=255) gTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTggc > 1:1250088/1‑98 (MQ=255) gTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTggc < 2:1250088/98‑1 (MQ=255) tGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCgg < 1:1031540/150‑1 (MQ=255) ttttCCAGGCGGTGTTTGCTGTCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTTAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGGAGGCGCCGTCTCCGGCCTCCAGCTTGCCGgcg > 2:159233/1‑150 (MQ=255) ttCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCgct > 1:670262/1‑150 (MQ=255) tCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCgctg > 1:966228/1‑150 (MQ=255) cAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCgctgct > 1:650083/1‑150 (MQ=255) cAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCgctgct < 2:1421522/150‑1 (MQ=255) aGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGctgctg > 1:190009/1‑150 (MQ=255) ggCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCtgctgc < 1:1326856/150‑1 (MQ=255) cGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGa < 2:650083/150‑1 (MQ=255) tgtTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAgtg < 1:1366750/150‑1 (MQ=255) tttGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAgtggt > 2:776873/1‑150 (MQ=255) gctgcCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTc > 2:202453/1‑150 (MQ=255) tgcCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCgg > 2:1057117/1‑150 (MQ=255) ggcCGCGCTGGTCGGCATCGCGGCAATTGGCGCTGGGTGTGTAGCCCGGGAGGCGCAGGTCGTTGAACTGGCGGCTGTTGTCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCgg < 2:233825/149‑1 (MQ=255) gcCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGgc < 2:1148146/150‑1 (MQ=255) | CAGGCGCACGCCGGACTCGGCCACCGAGCCGTAGTTGCTGTCGTAGCGGCTGTACGACAGGCCGGCGTAGCCGTGGTCCCAGTGGTAGGCACCACCGATTGCGCCGCCGTCCTGGCGACCGTCGCTGTTTTCCAGGCGGTGTTTGCTGCCGGGCTCGTCGGCATCGCGCACCTTGGCGCTGCGTGCATAGCCCGGGATGCGCAGGTCGTTGAACTGGCGGCTGTTGGCATCCAGGTGCAGGGCGAAGGCGCCGTCGCCGGCCTCCAGCTTGCCGGCGCTGCTGCGAGTGGTGTCGGC > NC_002947/1650295‑1650591 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |