| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1657077 = | 50 (0.950) | 3 (0.060) | 3/230 | NT | 6.5% | coding (1459/1698 nt) | PP_1450 | TPS family activation/secretion protein |
| ? | NC_002947 | 1657116 = | 40 (0.810) | coding (1420/1698 nt) | PP_1450 | TPS family activation/secretion protein | |||||
GCAGAGCGAGCTGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1657231‑1657077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgcTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGCAGGCAGCGGGTCACGGCTGTACTGCATGGCCAGCTCGCTCTGCCAGCGCCAAGGGCTGGGTGCCGGGCCT > NC_002947/1657116‑1657258 GCAGAGCGAGCTGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAG > 1:868121/1‑148GCAGAGCGAGCTGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAG < 2:868121/148‑1 GCGAGCTGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGC < 2:302703/150‑1 TGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGC > 1:1077145/1‑110 TGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGC < 2:1077145/110‑1 CTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCT > 1:636710/1‑59 CTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCT < 2:636710/59‑1 ACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGCTGGCACCGGAGTAAGTGTGC < 1:634973/75‑1 ACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGCTGGCACCGGAGTAAGTGTGC > 2:634973/1‑75 ACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTG < 1:961409/54‑1 ACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTG > 2:961409/1‑54 GCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGCAGGCAGCGGGTCACGGCTGTACTGCATGGCCAGCTCGC > 1:1150422/1‑150 GGCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAATGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGCAGGCAGCGGGTCACGGCTGTACTGCATGGCCAGCTCGCTCTGCCAGCGCCAAGGGCTGGGTGCCGGGCC > 2:685387/1‑150 GCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAATGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGCAGGCAGCGGGTCACGGCTGTACTGCATGGCCAGCTCGCTCTGCCAGCGCCAAGGGCTGGGTGCCGGGCCT < 1:685387/150‑1 TGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGC < 1:94624/76‑1 TGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGC > 2:94624/1‑76 GCAGAGCGAGCTGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGGTGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1657231‑1657077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgcTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCGTCGCTGACCAGCAGCTGTTCGACGGCAGGCAGCGGGTCACGGCTGTACTGCATGGCCAGCTCGCTCTGCCAGCGCCAAGGGCTGGGTGCCGGGCCT > NC_002947/1657116‑1657258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |