| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1923519 = | 68 (1.290) | 4 (0.080) | 4/240 | NT | 5.9% | coding (563/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease |
| ? | NC_002947 | 1923543 = | 62 (1.210) | coding (539/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease | |||||
TGGCAGGCCGCACTGCTGGTGGTGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1923547‑1923519‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATG > NC_002947/1923543‑1923689 TGGCAGGCCGCACTGCTGGTGGTGCTGCCTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGAT < 1:195432/85‑1TGGCAGGCCGCACTGCTGGTGGTGCTGCCTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGAT > 2:195432/1‑85 CAGGCCGCACTGCTGGTGGTGCTGCCTGCCAGGTGCTGGCGCC < 1:1407132/43‑1 CAGGCCGCACTGCTGGTGGTGCTGCCTGCCAGGTGCTGGCGCC > 2:1407132/1‑43 GCCTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGACCGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATG < 2:15705/150‑1 GCCTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATt > 2:217146/1‑149 GCCTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATG < 2:1033765/150‑1 TGGCAGGCCGCACTGCTGGTGGTGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1923547‑1923519‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGCCAGGTGCTGGCGCCGAGCAGCTGCGCGGCGTCCATCAGGTCGCGCAGGTTGATGGCCTGCAGGTTGTTGGTGATGGCCCTGTACATGAACGGCAGGGCGATGGTGAAGTAGCAGCCGATCAGGATCCACGGTGTGCCGACCATG > NC_002947/1923543‑1923689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |