New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1928307	53 (1.010)	4 (0.080)	4/236	NT	7.6%	coding (1827/2154 nt)	PP_1728	membrane protein
	?	NC_002947	= 1928327	46 (0.910)					coding (1807/2154 nt)	PP_1728	membrane protein

GCCGACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1928155‑1928307 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggGAGTTCGGCTACGCGATCTTCCGCGTGGCAATCCCGCACAGCATGAACATCGACCAGGCGATCTCGCTGGTTCGCGAAGTGGGGCAGAAGCTGCGCAACGACCCGCTGATGCGCCGTAATATCTGGTCGCCGCTCGAGCTGCAGGG  <  NC_002947/1928327‑1928182                                                                                                                                                                                                                                                                                                             GCCGACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACG                                                                                                                                                       >  2:1355896/1‑150  ccaACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGC                                                                                                                                                      >  2:652869/4‑150  CCGACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGC                                                                                                                                                      >  2:1117914/1‑150   CGACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCG                                                                                                                                                     >  1:123876/1‑150                AAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCGGGAGTTCGGCTAC                                                                                                                                        >  1:997012/1‑150                                                                                GCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCGGGAGTTCGGCTACGCGATCTTCCGCGT                                                                                                                          <  1:215801/100‑1                                                                                GCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCGGGAGTTCGGCTACGCGATCTTCCGCGT                                                                                                                          >  2:215801/1‑100                                                                                                                                   TGCTGTGCGGGATTGCCACGCGGAAGATCGCGTAGCCGAACTCCCGCGTGGCAATCCCGCACAGCATGAACATCGACCAGGCGATCTCGCTGGTTCGCGAAGTGGGGCAGAAGCTGCGCAACGACCCGCTGATGCGCCGTAATATCTGGT                     >  2:997012/1‑150                                                                                                                                                     CGCGGGAGTTCGGCTACGCGATCTTCCGCGTGGCAATCCCGCACAGCATGAACATCGACCAGGCGATCTCGCTGGTTCGCGAAGTGGGGCAGAAGCTGCGCAACGACCCGCTGATGCGCCGTAATATCTGGTCGCCGCTCGAGCTGCAGG   <  1:795735/150‑1                                                                                                                                                      GCGGGAGTTCGGCTACGCGATCTTCCGCGTGGCAATCCCGCACAGCATGAACATCGACCAGGCGATCTCGCTGGTTCGCGAAGTGGGGCAGAAGCTGCGCAACGACCCGCTGATGCGCCGTAATATCTGGTCGCCGCTCGAGCTGCAGGG  >  2:362992/1‑150                                                                                                                                                                                                                                                                                                             GCCGACCCTGACTCGAAGCTCTCCACCCCCTGCAGCTCGAGCGGCGACCAGATATTACGGCGCATCAGCGGGTCGTTGCGCAGCTTCTGCCCCACTTCGCGAACCAGCGAGATCGCCTGGTCGATGTTCATGCTGTGCGGGATTGCCACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1928155‑1928307 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggGAGTTCGGCTACGCGATCTTCCGCGTGGCAATCCCGCACAGCATGAACATCGACCAGGCGATCTCGCTGGTTCGCGAAGTGGGGCAGAAGCTGCGCAACGACCCGCTGATGCGCCGTAATATCTGGTCGCCGCTCGAGCTGCAGGG  <  NC_002947/1928327‑1928182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.