| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2145840 | 44 (0.840) | 5 (0.100) | 5/232 | NT | 10.1% | coding (151/465 nt) | etp | phosphotyrosine‑protein phosphatase |
| ? | NC_002947 | = 2145863 | 48 (0.970) | coding (174/465 nt) | etp | phosphotyrosine‑protein phosphatase | |||||
GCCTGATGCGCGTCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2145685‑2145840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCGCCTTGCAGGTGCGGCTGTCTGGCGCCTTGCCGACATGCCAATCGCCGGTGCCGGCAGAAGCCACCTGCACCTTGTCAGCGAGCCCGGCGGCGTGCAATTGATGGCGCAGCACGCCTTCGGCGGTGGGCGAGCGGCAGA < NC_002947/2145863‑2145721 GCCTGATGCGCGTCCTGTTCGTGTGCCTGGGCAACATGTCCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGG < 1:1007828/150‑1 TGATGCGCGTCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAACGTGCAGGTCGCTTCTCCCGGCACCGGCGATTGGCATGTCGGCAAGGCGC < 1:1134191/150‑1 ATGCGCGTCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCA < 2:887067/150‑1 ATGCGCGTCCTGTTCGTGTGCCTGCGCAACACCTGCCGCTCGCCCACCGCCGAAGCCGTGCTGCGCCATCGATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCA < 2:665606/150‑1 GCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCTGGCGCCTTGCC < 1:1275198/150‑1 CCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCT > 1:75716/1‑111 CCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCT < 2:75716/111‑1 TTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCTG > 1:1347026/1‑105 TTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCTG < 2:1347026/105‑1 TTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGC < 1:351167/76‑1 TTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGC > 2:351167/1‑76 GCGCCAGCGCCGCCTTGCAGGTGCGGCTGTCTGGCGCCTTGCCGACATGCCAATCGCCGGTGCCGGCAGAAGCCACCTGCACCTTGTCAGCGAGCCCGGCGGCGTGCAATTGATGGCGCAGCACGCCTTCGGCGGTGGGCGAGCGGCAGA < 1:932050/150‑1 GCCTGATGCGCGTCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2145685‑2145840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCGCCTTGCAGGTGCGGCTGTCTGGCGCCTTGCCGACATGCCAATCGCCGGTGCCGGCAGAAGCCACCTGCACCTTGTCAGCGAGCCCGGCGGCGTGCAATTGATGGCGCAGCACGCCTTCGGCGGTGGGCGAGCGGCAGA < NC_002947/2145863‑2145721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |