New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2145840	44 (0.840)	5 (0.100)	5/232	NT	10.1%	coding (151/465 nt)	etp	phosphotyrosine‑protein phosphatase
	?	NC_002947	= 2145863	48 (0.970)					coding (174/465 nt)	etp	phosphotyrosine‑protein phosphatase

TCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTGCGCGCCCTGCGCC  >  NC_002947/2145697‑2145987                                                                                                                                                |                                                                                                                                                    tCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGcc                                                                                                                                               <  1:936476/150‑1 (MQ=255)    agTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCa                                                                                                                                            >  2:974128/2‑150 (MQ=255)               cTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAggcg                                                                                                                                 >  2:1359202/1‑150 (MQ=255)               cTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGCCGTGCTGCGCCATAAACCACACGCCGCCCGGCTCGCTGACAAGGTACAGGTGGCTTCTGCCGGCACCGGCAATTGGCATGTCGTCAATGCGCCAGACAGCCGCACCTGCAAggct                                                                                                                                 >  2:143138/1‑149 (MQ=255)                tGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAggcgg                                                                                                                                >  1:567586/1‑150 (MQ=255)                         tCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGctggcgc                                                                                                                       <  1:932050‑M2/150‑8 (MQ=255)                              cGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGt                                                                                                                  <  2:323626/150‑1 (MQ=255)                               gCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGcgccgccttgcaggtgcggctgtctggcgccttgcc                                                                                                                 <  1:1275198‑M1/150‑37 (MQ=255)                               gCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGtt                                                                                                                 >  1:221059/1‑150 (MQ=255)                                    cccACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGACACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGAc                                                                                                            <  2:48390/150‑1 (MQ=255)                                       aCCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTg                                                                                                         >  2:1138403/1‑150 (MQ=255)                                         cgccgAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTc                                                                                                       <  1:974128/150‑1 (MQ=255)                                                   gTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTAc                                                                                                               >  1:670841/1‑132 (MQ=255)                                                   gTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTAc                                                                                                               <  2:670841/132‑1 (MQ=255)                                                     gctgcGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACgcgc                                                                                           >  2:1189566/1‑150 (MQ=255)                                                           ccATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGcgccgccttgcaggtgcggctgtct                                                                                                                            <  2:75716‑M1/111‑26 (MQ=255)                                                           ccATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGcgccgccttgcaggtgcggctgtct                                                                                                                            >  1:75716‑M1/1‑86 (MQ=255)                                                                  ttGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGcgccgccttgcaggtgcggctgtctg                                                                                                                           <  2:1347026‑M1/105‑27 (MQ=255)                                                                  ttGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGcgccgccttgcaggtgcggctgtctg                                                                                                                           >  1:1347026‑M1/1‑79 (MQ=255)                                                                      aCGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAgg                                                                                   <  1:1427446/141‑1 (MQ=255)                                                                      aCGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAgg                                                                                   >  2:1427446/1‑141 (MQ=255)                                                                      aCGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCAt                                                                          >  2:1294612/1‑150 (MQ=255)                                                                              gggCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGTTTTGTTGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTc                                                                  <  2:904712/150‑1 (MQ=255)                                                                                 cTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCTcc                                                               <  2:904617/150‑1 (MQ=255)                                                                                    gCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGa                                                                                                                                                    <  2:641809/62‑1 (MQ=255)                                                                                    gCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGa                                                                                                                                                    >  1:641809/1‑62 (MQ=255)                                                                                       gACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGTCGCACCTGCAAGGCGGCGCTGGCGCGCGGAGACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATAc                                                         >  1:728419/1‑150 (MQ=255)                                                                                        aCAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCgcag                                                                                                   >  2:51023/1‑107 (MQ=255)                                                                                        aCAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCgcag                                                                                                   <  1:51023/107‑1 (MQ=255)                                                                                               gCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGgt                                                 >  2:855816/1‑150 (MQ=255)                                                                                                  ggTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCgca                                                                                                    <  1:175216/96‑1 (MQ=255)                                                                                                  ggTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCgca                                                                                                    >  2:175216/1‑96 (MQ=255)                                                                                                   gTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTg                                             >  2:843404/1‑150 (MQ=255)                                                                                                       cTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGCTGGCCa                                         >  1:53506/1‑150 (MQ=255)                                                                                                        ttCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTc                                                                  >  1:254494/1‑124 (MQ=255)                                                                                                        ttCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTc                                                                  <  2:254494/124‑1 (MQ=255)                                                                                                            gCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGAt                                    <  1:1189566/150‑1 (MQ=255)                                                                                                            gCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGAt                                    <  1:1138403/150‑1 (MQ=255)                                                                                                              cGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGa                                  <  2:1199307/150‑1 (MQ=255)                                                                                                              cGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGa                                  >  2:1129690/1‑150 (MQ=255)                                                                                                                    cGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACaa                            <  2:698893/150‑1 (MQ=255)                                                                                                                        gATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTg                        >  2:1369091/1‑150 (MQ=255)                                                                                                                         aTTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTgc                       <  2:546934/150‑1 (MQ=255)                                                                                                                             gCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACa                                                                                     <  1:702417/84‑1 (MQ=255)                                                                                                                             gCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACa                                                                                     >  2:702417/1‑84 (MQ=255)                                                                                                                             gCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAg                                                                                    <  2:1312109/85‑1 (MQ=255)                                                                                                                             gCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAg                                                                                    >  1:1312109/1‑85 (MQ=255)                                                                                                                             gCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGa                   >  2:460059/1‑150 (MQ=255)                                                                                                                                  tCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTgc              <  2:184222/150‑1 (MQ=255)                                                                                                                                    ggCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaattgatggcgcagcacgccttcggcggtgggcgagc            <  1:1275198‑M2/150‑115 (MQ=255)                                                                                                                                    ggCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTgcgc            >  1:564677/1‑150 (MQ=255)                                                                                                                                          gcgcCAGcgccgccttgcaggtgcggctgtctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaattgatggcgcagcacgccttcggcggtgggcgagcggcaga      <  1:932050‑M1/150‑144 (MQ=255)                                                                                                                                           cgcCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGaa                                                            >  2:370889/1‑95 (MQ=255)                                                                                                                                           cgcCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGaa                                                            <  1:370889/95‑1 (MQ=255)                                                                                                                                             ccAGACAGCCGCCCCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTGCGCGCCCTgcgc   <  1:1359202/150‑1 (MQ=255)                                                                                                                                              cAGACAGCCGCACCTGCAAGGCGGCGctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaa                                               <  2:1347026‑M2/105‑80 (MQ=255)                                                                                                                                              cAGACAGCCGCACCTGCAAGGCGGCGctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaa                                               >  1:1347026‑M2/1‑26 (MQ=255)                                                                                                                                              cAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTGCGCGCCCTGCGcc  >  2:422508/1‑150 (MQ=255)                                                                                                                                               aGACAGCCGCACCTGCAAGGCGGCGctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaattgatgg                                        <  2:75716‑M2/111‑87 (MQ=255)                                                                                                                                               aGACAGCCGCACCTGCAAGGCGGCGctggcgccttgccgacatgccaatcgccggtgccggcagaagccacctgcaccttgtcagcgagcccggcggcgtgcaattgatgg                                        >  1:75716‑M2/1‑25 (MQ=255)                                                                                                                                                |                                                                                                                                                    TCCTGTTCGTGTGCCTGGGCAACATCTGCCGCTCGCCCACCGCCGAAGGCGTGCTGCGCCATCAATTGCACGCCGCCGGGCTCGCTGACAAGGTGCAGGTGGCTTCTGCCGGCACCGGCGATTGGCATGTCGGCAAGGCGCCAGACAGCCGCACCTGCAAGGCGGCGCTGGCGCGCGGTTACGACCTGTCGCAGCAACGCGCCCAACAGGTCAAGGCATCGCACTTCGCCGAATACGACCTGGTGTTGGCCATGGATGAGCACAACCTGCGCGATCTGCGCGCCCTGCGCC  >  NC_002947/2145697‑2145987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.