| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2743625 = | 58 (1.100) | 5 (0.100) | 5/230 | NT | 9.3% | intergenic (+21/‑54) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein |
| ? | NC_002947 | 2743662 = | 43 (0.880) | intergenic (+58/‑17) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein | |||||
ACACTCCAGAAAGTCCACTGCACCCGCCTCCATGGCCAGCAGTTCCGGCAACAGGCCGCGACGCAAGCCTAGGCCAACGTTCAACATCGCAGGAAACATAAAAGTTCTCCAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2743777‑2743625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTG > NC_002947/2743662‑2743791 ACACTCCAGAAAGTCCACTGCACCCGCCTCCATGGCCAGCAGTTCCGGCAACAGGCCGCGACGCAAGCCTAGGCCAACGTTCAACATCGCAGGAAACATAAAAGTTCTCCAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTT < 1:1101264/150‑1ACACTCCAGAAAGTCCACTGCACCCGCCTCCATGGCCAGCAGTTCCGGCAACAGGCCGCGACGCAAGCCTAGGCCAACGTTCAACATCGCAGGAAACATAAAAGTTCTCCAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTT < 2:1136330/150‑1 CACTCCAGAAAGTCCACTGCACCCGCCTCCATGGCCAGCAGTTCCGGCAACAGGCCGCGACGCAAGCCTAGGCCAACGTTCAACATCGCAGGAAACATAAAAGTTCTCCAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTG < 1:600415/150‑1 CAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTT > 1:1289872/1‑96 CAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTT < 2:1289872/96‑1 AGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTGCCTATTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTG > 1:292367/1‑150 GCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTGCCTATTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGA < 2:292367/150‑1 AACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGAGTGT > 2:116791/1‑150 GCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTG < 1:1167054/138‑1 GCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTG > 2:1167054/1‑138 GTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTG < 1:1249613/116‑1 GTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTG > 2:1249613/1‑116 ACACTCCAGAAAGTCCACTGCACCCGCCTCCATGGCCAGCAGTTCCGGCAACAGGCCGCGACGCAAGCCTAGGCCAACGTTCAACATCGCAGGAAACATAAAAGTTCTCCAACAGGCACAACGCCCCACCTGGCCAGCAGGAGGAGCGTTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2743777‑2743625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGGGTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTG > NC_002947/2743662‑2743791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |