| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2743625 = | 58 (1.100) | 5 (0.100) | 5/230 | NT | 9.3% | intergenic (+21/‑54) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein |
| ? | NC_002947 | 2743662 = | 43 (0.880) | intergenic (+58/‑17) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein | |||||
GGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTGGATTGCCGTGGGCGGC > NC_002947/2743514‑2743807 | tccagaaagtccactgcacccgcctccatggccagcagttccggcaacaggccgcgacgcaagcctaggccaacgttcaacatcgcaggaaacataaaagttctccaataggCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGc < 2:292367‑M1/38‑1 (MQ=255) cagaaagtccactgcacccgcctccatggccagcagttccggcaacaggccgcgacgcaagcctaggccaacgttcaacatcgcaggaaacataaaagttctccaataggCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCt > 1:292367‑M1/111‑150 (MQ=255) aGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGt < 1:710575/150‑1 (MQ=255) gCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGga < 2:601467/150‑1 (MQ=255) ccGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGgag < 2:857747/150‑1 (MQ=255) ccGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGgag < 2:810963/150‑1 (MQ=255) cTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTa > 2:1374814/1‑150 (MQ=255) aGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGCTGGAGAACTTTTATGtt > 2:387303/1‑150 (MQ=255) ggCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGttt > 2:164408/1‑150 (MQ=255) ggCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGttt > 1:670960/1‑150 (MQ=255) tttACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGc > 2:1270037/1‑150 (MQ=255) cAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAAc < 1:1374814/150‑1 (MQ=255) tgaacaaGCCAT‑CCGGCATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGtt > 2:637278/6‑150 (MQ=255) ggCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGTCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTg < 2:516383/150‑1 (MQ=255) ggCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTg < 1:18918/150‑1 (MQ=255) acaaGCCATCCGGC‑ATGGCTTGTTCAGCAACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGc > 2:797145/3‑150 (MQ=255) gCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGTACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAg < 1:1154795/150‑1 (MQ=255) gCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAg < 1:1270037/150‑1 (MQ=255) ccATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAgg > 2:1216443/1‑150 (MQ=255) g‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCt < 1:1226864/119‑1 (MQ=255) g‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCt > 2:1226864/1‑119 (MQ=255) tGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAGACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTCCGATGTTGACTGTTCGCCTAGGCTTGCGTcgc > 1:365083/1‑150 (MQ=255) aagcctaggccaacgttcaacatcgcaggaaacataaaagttctccaacaggCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTg < 2:1289872‑M1/44‑1 (MQ=255) aagcctaggccaacgttcaacatcgcaggaaacataaaagttctccaacaggCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTg > 1:1289872‑M1/53‑96 (MQ=255) ttGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGgag < 2:1332388/97‑1 (MQ=255) ttGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGgag > 1:1332388/1‑97 (MQ=255) aGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGAt < 2:239922/112‑1 (MQ=255) aGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGAt > 1:239922/1‑112 (MQ=255) ccACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCg < 2:1219947/150‑1 (MQ=255) aCCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGa > 2:1100941/1‑150 (MQ=255) ccTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGaa < 2:1024453/150‑1 (MQ=255) gCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGc > 2:28545/1‑150 (MQ=255) cAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAgg < 1:870331/116‑1 (MQ=255) cAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAgg > 2:870331/1‑116 (MQ=255) gACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGc < 2:611630/150‑1 (MQ=255) cGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGACCGTTGGCCGAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCgg < 1:28545/150‑1 (MQ=255) gTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCgg‑g > 2:1097803/1‑150 (MQ=255) ccccATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTAt < 2:513696/69‑1 (MQ=255) ccccATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTAt > 1:513696/1‑69 (MQ=255) cccATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTg < 1:637278/150‑1 (MQ=255) cccATGAAACGCCACAACGCTCCTCCTCCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTg > 1:749498/1‑150 (MQ=255) ccATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCATTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATg < 2:341313/134‑1 (MQ=255) ccATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCATTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATg > 1:341313/1‑134 (MQ=255) caacaggcacaacgccccacctggccagcaggaggagcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCtt < 2:1289872‑M2/52‑1 (MQ=255) caacaggcacaacgccccacctggccagcaggaggagcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCtt > 1:1289872‑M2/45‑96 (MQ=255) aaCGCCACAACGCCCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTc > 2:460098/1‑150 (MQ=255) aggcacaacgccccacctggccagcaggaggagcgttgtgCCTATTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTg > 1:292367‑M2/41‑150 (MQ=255) gcacaacgccccacctggccagcaggaggagcgttgtgCCTATTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGa < 2:292367‑M2/112‑1 (MQ=255) ccACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCTGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGa < 2:309593/150‑1 (MQ=255) CAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAgtg < 1:600415‑M1/150‑1 (MQ=255) aacgccccacctggccagcaggaggagcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAgtgt > 2:116791‑M2/35‑150 (MQ=255) AACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAgtgt < 1:1101264‑M1/150‑1 (MQ=255) AACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAgtgt < 2:1136330‑M1/150‑1 (MQ=255) ctcctGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAGTGTGCGCCgg > 2:323408/1‑150 (MQ=255) ctgctgGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGc < 1:987804/115‑1 (MQ=255) ctgctgGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGc > 2:987804/1‑115 (MQ=255) gcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTg > 2:1167054‑M2/9‑138 (MQ=255) gcgttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTg < 1:1167054‑M2/130‑1 (MQ=255) gCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGTCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCAGTGATTCGG‑GTGCTGTGTACGTTCGGGAGGGGGCTCCGTGAAACTGGATTGGCGTggg > 2:299322/1‑150 (MQ=255) gttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTg > 2:1249613‑M2/7‑116 (MQ=255) gttgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTg < 1:1249613‑M2/110‑1 (MQ=255) tgtgCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGCAATGCTGGCAATAATGGAGGCGATGAGTCG‑GTGGTGGGAGTGTGCGCCGGAAAACTGGATTGCCGTGggcggc < 1:387303/150‑1 (MQ=255) | GGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGG‑ATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCTCCTCCTGCTGGCCAGGTGGGGCGTTGTGCCTGTTGGAGAACTTTTATGTTTCCTGCGATGTTGAACGTTGGCCTAGGCTTGCGTCGCGGCCTGTTGCCGGAACTGCTGGCCATGGAGGCGG‑GTGCAGTGGACTTTCTGGAGTGTGCGCCGGAAAACTGGATTGCCGTGGGCGGC > NC_002947/2743514‑2743807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |