| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3039864 | 38 (0.720) | 3 (0.060) | 3/240 | NT | 7.5% | coding (906/1344 nt) | PP_2651 | MFS transporter |
| ? | NC_002947 | = 3039918 | 37 (0.720) | coding (960/1344 nt) | PP_2651 | MFS transporter | |||||
ACAAGAGCACCTGGGGCGCAGTACTGGGCTTCATGGGGGTGATCTACATGCTGTGGCTGCACCTGACCTGGCTGCCGGGCTACTTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3039713‑3039864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACACATAGGCCAGCGAAACCACCCAGGCGGTCTGGTACAGGCTCAAGCCATGCTCGCGTTCGAAGTAGCCCGGCAGCCAGGTCAGGTG < NC_002947/3039918‑3039772 ACAAGAGCACCTGGGGCGCAGTACTGGGCTTCATGGGGGTGATCTACATGCTGTGGCTGCACCTGACCTGGCTGCCGGGCTACTTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCG < 1:866107/150‑1 CAAGAGCACCTGGGGCGCAGTACTGGGCTTCATGGGGGTGATCTACATGCTGTGGCTGCACCTGACCTGGCTGCCGGGCTACTTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGG < 2:731541/150‑1 GACCTGGCTGCCGGGCTACTTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGGCACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACA < 2:427392/150‑1 TTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGGCACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACACATAGG > 1:508201/1‑137 TTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGGCACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACACATAGG < 2:508201/137‑1 GGCACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACACATAGGCCCGCTAGACCACCCAGGCGGTCTTTTACAGGCTCAAGCCATGCTCGCGTTCGAAGTAGCCCGGCAGCCAGGTCAGGTG < 1:173685/150‑1 ACAAGAGCACCTGGGGCGCAGTACTGGGCTTCATGGGGGTGATCTACATGCTGTGGCTGCACCTGACCTGGCTGCCGGGCTACTTCGAACGCGAGCATGGCTTGAGCCTGTACCAGACCGCCTGGGTGGTTTCGCTGGCCTATGTGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3039713‑3039864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACCTTGCTTCACCAGGCGGTCGCAGATGCGGCCCGCGACAATGGTGCCCAACGCGCCGAACACATAGGCCAGCGAAACCACCCAGGCGGTCTGGTACAGGCTCAAGCCATGCTCGCGTTCGAAGTAGCCCGGCAGCCAGGTCAGGTG < NC_002947/3039918‑3039772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |