New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3397200 =	72 (1.370)	7 (0.140)	6/232	NT	9.3%	coding (867/1233 nt)	PP_3001	CAIB/BAIF family protein
	?	NC_002947	3397226 =	69 (1.390)					coding (893/1233 nt)	PP_3001	CAIB/BAIF family protein

CGTGCCTGGATCTGCGGGTCGGCCAGCACTTCATCGATGCGTTGAACCTTGGCACTGGGGATGTCGATGCCATCGAGCAACGCCAGGATCTCGGCCACCCGACGCGCGCCAACCCAATCGCGGACCACCGCCAGGATCGCCTCGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3397349‑3397200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtggTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACGCAACATGGTCATCGAGCAGCAGCAC  >  NC_002947/3397226‑3397374                                                                                                                                                                                                                                                                                                             CGTGCCTGGATCTGCGGGTCGGCCAGCACTTCATCGATGCGTTGAACCTTGGCACTGGGGATGTCGATGCCATCGAGCAACGCCAGGATCTCGGCCACCCGACGCGCGCCAACCCAATCGCGGACCACCGCCAGGATCGCCTCGCGGTGG                                                                                                                                                       <  1:823455/150‑1                GGGTCGGCCAGCACTTCATCGATGCGTTGAACCTTGGCACTGGGGATGTCGATGCCATCGAGCAACGCCAGGATCTCGGCCACCCGACGCGCGCCAACCCAATCGCGGACCACCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGG                                                                                                                                            <  1:5761/146‑1                GGGTCGGCCAGCACTTCATCGATGCGTTGAACCTTGGCACTGGGGATGTCGATGCCATCGAGCAACGCCAGGATCTCGGCCACCCGACGCGCGCCAACCCAATCGCGGACCACCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGG                                                                                                                                            >  2:5761/1‑146                                                                                                                              CACCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGAT                                                                                                  >  1:127713/1‑78                                                                                                                              CACCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGAT                                                                                                  <  2:127713/78‑1                                                                                                                              CACCGCCAGGATCGCCTCGCGGTGGTCCGCGACTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTTCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACGC                          >  1:1182148/1‑150                                                                                                                                CCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGC                                                                                                            <  1:1112666/66‑1                                                                                                                                CCGCCAGGATCGCCTCGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGC                                                                                                            >  2:1112666/1‑66                                                                                                                                               CGCGGTGGTCCGCGATTGGGTTGGCGCCCGTCCCGTCGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACGCAACATGGTCATCGAGCA         <  2:1182148/150‑1                                                                                                                                                      GTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGAGCCTTTCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACGCAACATGGTCATCGAGCAGCAGCAC  <  1:317810/150‑1                                                                                                                                                                                                                                                                                                             CGTGCCTGGATCTGCGGGTCGGCCAGCACTTCATCGATGCGTTGAACCTTGGCACTGGGGATGTCGATGCCATCGAGCAACGCCAGGATCTCGGCCACCCGACGCGCGCCAACCCAATCGCGGACCACCGCCAGGATCGCCTCGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3397349‑3397200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtggTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACGCAACATGGTCATCGAGCAGCAGCAC  >  NC_002947/3397226‑3397374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.