New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3397200 =72 (1.370)7 (0.140) 6/232 NT 9.3% coding (867/1233 nt) PP_3001 CAIB/BAIF family protein
?NC_002947 3397226 = 69 (1.390)coding (893/1233 nt) PP_3001 CAIB/BAIF family protein

GGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACG  >  NC_002947/3397051‑3397349
                                                                                                                                                     |                                                                                                                                                     
gtgctgctgctcgatgaccatgttgcgtgcctggatctgcgggtcggccagcacttcatcgatgcgttgaaccttggcactggggatgtcgatgccatcgagcaacgaaaggctctcggccacccgacgcgcgccaacccaatcgcggac                                                                                                                                                       <  1:317810‑M1/1‑1 (MQ=255)
       tgctcgatgaccatgttgcgtgcctggatctgcgggtcggccagcacttcatcgatgcgttgaaccttggcactggggatgtcgatgccatcgagcaacgccaggatctcggcgacgggacgggcgccaacccaatcgcggaCCACcgcg                                                                                                                                                <  2:1182148‑M1/8‑1 (MQ=255)
         cgcgCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAg                                                                                                                                              <  1:137131/150‑1 (MQ=255)
         cgcgCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAg                                                                                                                                              <  1:137279/150‑1 (MQ=255)
           cgcCACCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGc                                                                                                                                            <  1:230830/150‑1 (MQ=255)
               aCCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATc                                                                                                                                        >  1:573010/1‑150 (MQ=255)
               aCCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAAAGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATc                                                                                                                                        >  1:1139150/1‑150 (MQ=255)
                 cGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCt                                                                                                                                      >  2:405100/1‑150 (MQ=255)
                        gcgtgcctggatctgcgggtcggccagcacttcatcgatgcgttgaaccttggcactggggatgtcgatgccatcgagaaacgccaggatctcggccacccgacgcgcgccaacccagtcgcggaCCACCGCGAGGCGATCCTGGCggtg                                                                                                                               >  1:1182148‑M1/126‑150 (MQ=255)
                                gATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGa                                                                                                                       <  2:504533/150‑1 (MQ=255)
                                gATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGa                                                                                                                       <  1:631601/150‑1 (MQ=255)
                                  tCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCTAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGAtt                                                                                                                     <  2:162153/150‑1 (MQ=255)
                                  tCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGCGGCGATCCTGGCGGTGGTCCGCGAtt                                                                                                                     <  1:1260672/150‑1 (MQ=255)
                                     cggccCAGGTCGACGATGACTGGCAGCGATTCGCTGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTggg                                                                                                                  <  2:943908/148‑1 (MQ=255)
                                     ccgccCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTggg                                                                                                                  <  2:1187478/150‑1 (MQ=255)
                                      cgccCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACTCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGt                                                                                                                 <  1:1389356/150‑1 (MQ=255)
                                         ccAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTgg                                                                                                              >  1:1000209/1‑150 (MQ=255)
                                            ggTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGTCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGgcgc                                                                                                           <  2:588366/150‑1 (MQ=255)
                                                   gaTGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCGGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCgg                                                                                                    >  1:1168339/1‑150 (MQ=255)
                                                   gaTGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCGCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCgg                                                                                                    >  1:1389323/1‑150 (MQ=255)
                                                   gaTGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCgg                                                                                                    <  2:1000209/150‑1 (MQ=255)
                                                   gaTGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCgg                                                                                                    <  1:1198904/150‑1 (MQ=255)
                                                   gaTGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCgg                                                                                                    >  2:317810/1‑150 (MQ=255)
                                                       ccTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGAtt                                                                                                                     >  2:624255/1‑129 (MQ=255)
                                                       ccTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGAtt                                                                                                                     <  1:624255/129‑1 (MQ=255)
                                                        cTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGc                                                                                               >  1:899215/1‑150 (MQ=255)
                                                        cTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGc                                                                                               >  2:658533/1‑150 (MQ=255)
                                                           gCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCga                                                                                            >  2:1112088/1‑150 (MQ=255)
                                                             aGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCgaga                                                                                          >  2:302984/1‑150 (MQ=255)
                                                                   tCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTgg                                                                                    <  1:35573/150‑1 (MQ=255)
                                                                       ggCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGtt                                                                                <  1:215866/150‑1 (MQ=255)
                                                                       ggCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCATCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGAGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGtt                                                                                >  1:8917/1‑150 (MQ=255)
                                                                       ggCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCAACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGtt                                                                                >  1:330334/1‑150 (MQ=255)
                                                                          cATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCt                                                                             >  1:939384/1‑150 (MQ=255)
                                                                           aTGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTc                                                                            >  1:1235808/1‑150 (MQ=255)
                                                                             gCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGa                                                                          >  2:480625/1‑150 (MQ=255)
                                                                              cTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAgg                                                                                                                                             <  2:1150187/82‑1 (MQ=255)
                                                                              cTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAgg                                                                                                                                             >  1:1150187/1‑82 (MQ=255)
                                                                               tCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGCTg                                                                        >  2:1077226/1‑150 (MQ=255)
                                                                                cGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCGGAGATCCTGGCGTTGCTCGATgg                                                                       >  1:576426/1‑150 (MQ=255)
                                                                                 gAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCCACAGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGc                                                                      >  1:630295/1‑150 (MQ=255)
                                                                                            cggcCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATccc                                                           <  1:302984/150‑1 (MQ=255)
                                                                                                ccgcccgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGc                                                                                   >  2:1201322/1‑122 (MQ=255)
                                                                                                ccgcccgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGc                                                                                   <  1:1201322/122‑1 (MQ=255)
                                                                                                ccgcccgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGt                                                       <  2:1306882/150‑1 (MQ=255)
                                                                                                atcgagcaacgccaggatctcggccacccgacgcgcgccaacccaatcgcggaCCACCGCGAGGCGATCCTGGCggtg                                                                                                                               >  1:127713‑M1/54‑78 (MQ=255)
                                                                                                atcgagcaacgccaggatctcggccacccgacgcgcgccaacccaatcgcggaCCACCGCGAGGCGATCCTGGCggtg                                                                                                                               <  2:127713‑M1/25‑1 (MQ=255)
                                                                                                 cgcccgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTg                                                      <  1:381942/150‑1 (MQ=255)
                                                                                                    ccgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATACTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCa                                                   >  1:1077980/1‑150 (MQ=255)
                                                                                                     cgGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCaa                                                  <  1:405100/150‑1 (MQ=255)
                                                                                                      gggTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAg                                                 <  2:632120/150‑1 (MQ=255)
                                                                                                      gggTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAg                                                 <  2:1235808/150‑1 (MQ=255)
                                                                                                          gccaggatctcggccacccgacgcgcgccaacccaatcgcggaCCACCGCGAGGCGATCCTGGCgg                                                                                                                                 >  2:1112666‑M1/44‑66 (MQ=255)
                                                                                                          gccaggatctcggccacccgacgcgcgccaacccaatcgcggaCCACCGCGAGGCGATCCTGGCgg                                                                                                                                 <  1:1112666‑M1/23‑1 (MQ=255)
                                                                                                                 cGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCAt                                      <  1:282189/150‑1 (MQ=255)
                                                                                                                     cgccgcTACCACGGCCTCCACGCCGGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGAt                                  <  2:330334/150‑1 (MQ=255)
                                                                                                                       ccgcTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGa                                <  1:1112088/150‑1 (MQ=255)
                                                                                                                        cgcTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTg                                                                               <  1:540846/102‑1 (MQ=255)
                                                                                                                        cgcTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTg                                                                               >  2:540846/1‑102 (MQ=255)
                                                                                                                        cgcTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGaa                               <  1:480625/150‑1 (MQ=255)
                                                                                                                           tACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTg                            >  2:635981/1‑150 (MQ=255)
                                                                                                                             ccACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGGTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCt                          >  1:797217/1‑150 (MQ=255)
                                                                                                                             ccACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCt                          >  1:701129/1‑150 (MQ=255)
                                                                                                                              cACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTg                                                                                     >  1:111452/1‑90 (MQ=255)
                                                                                                                              cACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTg                                                                                     <  2:111452/90‑1 (MQ=255)
                                                                                                                              cACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATc                                                                   >  2:1098645/1‑108 (MQ=255)
                                                                                                                              cACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATc                                                                   <  1:1098645/108‑1 (MQ=255)
                                                                                                                              cACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTg                         <  2:1389323/150‑1 (MQ=255)
                                                                                                                               aCGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTgg                        >  1:236595/1‑150 (MQ=255)
                                                                                                                                    cTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGAc                   >  2:504940/1‑150 (MQ=255)
                                                                                                                                     tCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAg                                                 >  2:1195824/1‑119 (MQ=255)
                                                                                                                                     tCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAg                                                 <  1:1195824/119‑1 (MQ=255)
                                                                                                                                     tCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGAcc                  <  2:1359717/150‑1 (MQ=255)
                                                                                                                                         cGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCa              <  2:573010/150‑1 (MQ=255)
                                                                                                                                          ccaatcgcggaCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGAccc                 <  1:5761‑M1/135‑1 (MQ=255)
                                                                                                                                          ccaatcgcggaCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGAccc                 >  2:5761‑M1/12‑146 (MQ=255)
                                                                                                                                           gCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAAc                                          <  2:952881/120‑1 (MQ=255)
                                                                                                                                           gCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAAc                                          >  1:952881/1‑120 (MQ=255)
                                                                                                                                            ccGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGAt           <  2:236595/150‑1 (MQ=255)
                                                                                                                                             cGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATc                                                                                        <  2:1344228/72‑1 (MQ=255)
                                                                                                                                             cGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATc                                                                                        >  1:1344228/1‑72 (MQ=255)
                                                                                                                                                aaCGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAg       <  1:1044384/150‑1 (MQ=255)
                                                                                                                                                     CCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACg  <  1:823455‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTCGACGATGCCTGGCAGCGCTTCGCGGCCATGCTCGAAGCCAACGGCGGCCCGCCCGGGTTCGGCAGCGACCGCCGCTACCACGGCCTCAACGGCCGCAACGCCCACCGCGAGGCGATCCTGGCGGTGGTCCGCGATTGGGTTGGCGCGCGTCGGGTGGCCGAGATCCTGGCGTTGCTCGATGGCATCGACATCCCCAGTGCCAAGGTTCAACGCATCGATGAAGTGCTGGCCGACCCGCAGATCCAGGCACG  >  NC_002947/3397051‑3397349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.