New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3612528	50 (0.950)	3 (0.060)	3/234	NT	5.6%	coding (1199/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	= 3612563	53 (1.060)					coding (1164/3396 nt)	mcoA	Mn(II) copper oxidase A

CTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3612376‑3612528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccgTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAACCTTGTTCGTCAACGATGGTTCACCGGGCCTGAAAACCTGCGAGAACGGCAGCATCAAGATTCGTGGCGACTGGCGCGAAACCATGAGTACCCACTGGTTCCAC  <  NC_002947/3612563‑3612416                                                                                                                                                                                                                                                                                                               CTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCAC                                                                                                                                                         >  2:343051/1‑150                                                 AGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAAC                                                                                                         <  1:1402520/150‑1                                                                                                                             ACCATCGTTGACGAACAAGGTTTCACCCGTGCCCAGGACCCGCGTGCCGCTTTC                                                                                                                             <  1:485833/54‑1                                                                                                                             ACCATCGTTGACGAACAAGGTTTCACCCGTGCCCAGGACCCGCGTGCCGCTTTC                                                                                                                             >  2:485833/1‑54                                                                                                                                                       CCGTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAACCTTGTTCGTCAACGATGGTTCACCGGGCCTGAAAACCTGCGAGAACGGCAGCATCAAGATTCGTGGCGACTGGCGCGAAACCATGAG‑ACCCACTGGTTCCAC  <  2:648223/150‑1                                                                                                                                                       CCGTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAACCTTGTTCGTCAACGATGGTTCACCGGGCCTGAAAACCTG                                                                  >  1:137710/1‑87                                                                                                                                                       CCGTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAACCTTGTTCGTCAACGATGGTTCACCGGGCCTGAAAACCTG                                                                  <  2:137710/87‑1                                                                                                                                                                                                                                                                                                               CTTTGTAGACGTTCTGCGCCGTGAAATCCATCATGTGGTCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3612376‑3612528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccgTGCCCAGGACCCGCGTGCCGCTTTCCCCTGCTCGCCGGGTGAAACCTTGTTCGTCAACGATGGTTCACCGGGCCTGAAAACCTGCGAGAACGGCAGCATCAAGATTCGTGGCGACTGGCGCGAAACCATGAGTACCCACTGGTTCCAC  <  NC_002947/3612563‑3612416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.