New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3612528	50 (0.950)	3 (0.060)	3/234	NT	5.6%	coding (1199/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	= 3612563	53 (1.060)					coding (1164/3396 nt)	mcoA	Mn(II) copper oxidase A

TCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCA  >  NC_002947/3612414‑3612710                                                                                                                                                       |                                                                                                                                                    tCGTGGAACCAGCGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCa                                                                                                                                                     >  2:327616/1‑150 (MQ=255)   gTGGAACCAGTGGGT‑CTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCAcgg                                                                                                                                                  <  2:648223‑M2/150‑4 (MQ=255)          cAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTg                                                                                                                                            >  1:843660/1‑150 (MQ=255)            gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTg                                                                                                                                            >  2:370642/1‑148 (MQ=255)            gTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTg                                                                                                                                            <  1:370642/148‑1 (MQ=255)               gggtcTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                                                       <  1:648223/146‑1 (MQ=255)               ggTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGTTCACGGGTGTTGATGgt                                                                                                                                       <  2:837305/150‑1 (MQ=255)               ggTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                                                       <  2:843660/150‑1 (MQ=255)                    tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGt                                                                                                                                  >  2:671288/1‑150 (MQ=255)                    tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGt                                                                                                                                  >  1:686652/1‑150 (MQ=255)                    tCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGt                                                                                                                                  >  1:862182/1‑150 (MQ=255)                      aTGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAg                                                                                                                                >  1:948650/1‑150 (MQ=255)                       tGGTTTCGTGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCTCGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGTGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGc                                                                                                                               <  2:783723/150‑1 (MQ=255)                                gcCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCt                                                                                                                      >  2:1100218/1‑150 (MQ=255)                                         cACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGGCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGcc                                                                                                             >  1:312399/1‑150 (MQ=255)                                                 ttGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGCCCAGCAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAg                                                                                                     <  1:87128/150‑1 (MQ=255)                                                 ttGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAg                                                                                                     >  1:65813/1‑150 (MQ=255)                                                      gctgcCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgta                                                                                                >  1:1408547/1‑150 (MQ=255)                                                        tgcCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgtagt                                                                                              >  1:1188690/1‑150 (MQ=255)                                                             ttCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTgg                                                                                         <  2:730473/150‑1 (MQ=255)                                                                  gCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgtag                                                                                               <  2:1321479/139‑1 (MQ=255)                                                                  gCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCgtag                                                                                               >  1:1321479/1‑139 (MQ=255)                                                                   cAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCAcgg                                                                                                                                                  >  1:137710‑M2/1‑84 (MQ=255)                                                                   cAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCAcgg                                                                                                                                                  <  2:137710‑M2/87‑4 (MQ=255)                                                                            aGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGAAAGAAGTAc                                                                          >  2:170786/1‑150 (MQ=255)                                                                              gCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTAcgc                                                                        >  1:69972/1‑150 (MQ=255)                                                                                  ggTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                                                                    >  1:350966/1‑150 (MQ=255)                                                                                   gTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTgg                                                                   <  2:652608/150‑1 (MQ=255)                                                                                        ccATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAg                                                              <  2:862182/150‑1 (MQ=255)                                                                                         cATCGTTGACGAACAAGGCTTCCGGCCAGGAGCCAAGGCCAGGAGCAC‑ACGCCTCCTGTGCACGGGGTTGGATTGGGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGc                                                             >  2:1085757/1‑150 (MQ=255)                                                                                             gTTGACGAACAAGGTTTCCCCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                                                         <  1:303427/150‑1 (MQ=255)                                                                                             gTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGCAAGTGGAACGGCGGATCC‑GGGCTCGGGGTTTGATGGGGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                                                         >  1:387971/1‑150 (MQ=255)                                                                                             gTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                                                         >  2:623982/1‑150 (MQ=255)                                                                                             gTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                                                         <  1:327616/150‑1 (MQ=255)                                                                                             gTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTc                                                         <  2:1188690/150‑1 (MQ=255)                                                                                              ttGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                                                       >  2:581869/1‑71 (MQ=255)                                                                                              ttGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGgt                                                                                                                                       <  1:581869/71‑1 (MQ=255)                                                                                                gACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTc                                                                                                                                    <  1:877953/72‑1 (MQ=255)                                                                                                gACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTc                                                                                                                                    >  2:877953/1‑72 (MQ=255)                                                                                                   gAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTc                                                   >  1:474790/1‑150 (MQ=255)                                                                                                    aaCAAGGTTTCACCCGGCGAGCAGGGGACAGAGGCTA‑GTGGGGCGTGCAGATGCTCGTGTATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGACGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCg                                                  <  2:312399/150‑1 (MQ=255)                                                                                                    aaCAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCg                                                  <  2:948650/150‑1 (MQ=255)                                                                                                     aCAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgg                                                                                     >  1:761019/1‑114 (MQ=255)                                                                                                     aCAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCgg                                                                                     <  2:761019/114‑1 (MQ=255)                                                                                                          gTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCAcgggtgaaaccttgttcgtcaacgatggttcaccgggcctgaaaacctgcgagaacggcagcatcaagattcgtggcgactggcgcgaaaccatgagtacccact                                            <  1:1402520‑M2/150‑106 (MQ=255)                                                                                                           tttCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCgggg                                           >  2:88545/1‑150 (MQ=255)                                                                                                              cACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGt                                        <  2:69972/150‑1 (MQ=255)                                                                                                                 ccGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGc                                     <  2:65813/150‑1 (MQ=255)                                                                                                                 ccGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGc                                     >  1:350346/1‑150 (MQ=255)                                                                                                                 ccGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGc                                     >  2:944130/1‑150 (MQ=255)                                                                                                                 ccGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGc                                     >  1:559174/1‑150 (MQ=255)                                                                                                                     cGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGtt                                 <  2:474790/150‑1 (MQ=255)                                                                                                                        gCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTtgtg                              <  1:944130/150‑1 (MQ=255)                                                                                                                             ggAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGt                         <  2:387971/150‑1 (MQ=255)                                                                                                                              gAAAGCGGCAC‑GCGGGTCCTGGGCAcgggtgaaaccttgttcgtcaacgatggt                                                                                                                        >  2:485833‑M2/1‑25 (MQ=255)                                                                                                                              gAAAGCGGCAC‑GCGGGTCCTGGGCAcgggtgaaaccttgttcgtcaacgatggt                                                                                                                        <  1:485833‑M2/54‑30 (MQ=255)                                                                                                                                aaGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTggg                      >  2:1018538/1‑150 (MQ=255)                                                                                                                                  gCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCTGCCAGCTACACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                                                                    <  1:392970/102‑1 (MQ=255)                                                                                                                                  gCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTACACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTg                                                                    >  2:392970/1‑102 (MQ=255)                                                                                                                                              gTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTgg                       <  1:409264/136‑1 (MQ=255)                                                                                                                                              gTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTgg                       >  2:409264/1‑136 (MQ=255)                                                                                                                                               tCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGc        <  2:535844/150‑1 (MQ=255)                                                                                                                                                ccTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCa       >  2:411132/1‑150 (MQ=255)                                                                                                                                                     gCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCa  >  2:1049429/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                    TCGTGGAACCAGTGGGTACTCATGGTTTCGCGCCAGTCGCCACGAATCTTGATGCTGCCGTTCTCGCAGGTTTTCAGGCCCGGTGAACCATCGTTGACGAACAAGGTTTCACCCGGCGAGCAGGGGAAAGCGGCAC‑GCGGGTCCTGGGCACGGGTGTTGATGGTGTCGTAGCCGGCCAGCTGCACCGGCCAGCGGTAGTCGTAGTACTGGCCGGGGAAGAAGTACGCGTTGGCAAAGCCGTCGCTTTCGGCCGGGGAGTGGCCGTTGTGCTCGTGGGTCGAAATGGTATGCAGGCCA  >  NC_002947/3612414‑3612710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.