New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3632935 =52 (0.990)4 (0.080) 4/246 NT 7.7% coding (364/1062 nt) PP_3201 BNR domain‑containing protein
?NC_002947 3633003 = 44 (0.840)coding (432/1062 nt) PP_3201 BNR domain‑containing protein

CCGTTGCGCCGCCGCCAGGCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3633006‑3632935
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCAT  >  NC_002947/3633003‑3633098
                                                                                                                                                                        
CCGTTGCGCCGCCGCCAGGCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCGACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGG                    >  1:47251/1‑150
   TTGCGCCGCCGCCAGGCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCGACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGC                 <  2:47251/150‑1
          GCCGCCAGGCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCGACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATCTCATGTATTCTCGCAACGGCTTGGTCGTAGGTGGTTACGcg          >  2:233989/1‑148
                  GCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCGACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCAT  <  1:233989/150‑1
                                                                                                                                                                        
CCGTTGCGCCGCCGCCAGGCGACGCTCGTCTGCGGCAGCCTCGGCTGCCTGCACCTCCAGGGCGGCGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3633006‑3632935
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCAT  >  NC_002947/3633003‑3633098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.