New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3632935 =	52 (0.990)	4 (0.080)	4/246	NT	7.7%	coding (364/1062 nt)	PP_3201	BNR domain‑containing protein
	?	NC_002947	3633003 =	44 (0.840)					coding (432/1062 nt)	PP_3201	BNR domain‑containing protein

GGCTGGGCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGGAGATCGGC  >  NC_002947/3632854‑3633141                                                                                                                                                      |                                                                                                                                           ggCTGGGCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCaa                                                                                                                                            <  1:535767/150‑1 (MQ=255) gcaccgacgaccaggccgttgcgggcatcggtgaaattcagggccaacaacggcttgtccgcgccgtcggccagcagccgtCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCaa                                                                                                                                            <  2:47251‑M1/69‑1 (MQ=255)    ccgacgaccaggccgttgcgggcatcggtgaaattcagggccaacaacggcttgtccgcgccgtcggccagcagccgtCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACgg                                                                                                                                         >  1:47251‑M1/79‑150 (MQ=255)     gggCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGgc                                                                                                                                        <  1:1059283/150‑1 (MQ=255)     gggCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGgc                                                                                                                                        <  1:402826/150‑1 (MQ=255)     gggCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGgc                                                                                                                                        <  2:523243/150‑1 (MQ=255)             ggCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCATATTGGTGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGcc                                                                                                                                <  1:865735/150‑1 (MQ=255)             ggCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGcc                                                                                                                                <  2:818516/150‑1 (MQ=255)                     cGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGgcgc                                                                                                                        >  1:146768/1‑150 (MQ=255)                             tCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGc                                                                                                                >  1:131025/1‑150 (MQ=255)                                   acaGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGcc                                                                                                               <  2:1147488/145‑1 (MQ=255)                                   acaGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGcc                                                                                                               >  1:1147488/1‑145 (MQ=255)                                   acaGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGGCTCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCgttgt                                                                                                          >  1:878735/1‑150 (MQ=255)                                     aGCCAGGATGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGttgttg                                                                                                        <  1:1317334/150‑1 (MQ=255)                                        cAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGcc                                                                                                     <  2:1187576/150‑1 (MQ=255)                                        cAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGcc                                                                                                     <  2:936984/150‑1 (MQ=255)                                         aGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGccc                                                                                                    <  2:1384596/150‑1 (MQ=255)                                             cGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCTTggt                                                                                                <  1:410177/150‑3 (MQ=255)                                                    gAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCAcc                                                                                         <  1:254046/150‑1 (MQ=255)                                                       cACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGAt                                                                                      >  1:197509/1‑150 (MQ=255)                                                       cACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCACTGAATTTCACCGAt                                                                                      >  2:990042/1‑150 (MQ=255)                                                               cGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGAGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCaa                                                                              >  2:822351/1‑150 (MQ=255)                                                                gTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAAc                                                                             >  2:1198113/1‑150 (MQ=255)                                                                    aGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGcc                                                                         >  2:1265481/1‑150 (MQ=255)                                                                              ccgttgcgccgccgccaggcgacgctcgtctgcggcagcctcggctgcctgcacctccagggcggcggcgcgACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCgg                                                               >  1:47251‑M2/73‑150 (MQ=255)                                                                               aaGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCGCCGATg                                                                                     <  2:236011/127‑1 (MQ=255)                                                                               aaGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATg                                                                                     >  1:236011/1‑127 (MQ=255)                                                                                aGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTg                                                             <  1:210269/150‑1 (MQ=255)                                                                                 ttgcgccgccgccaggcgacgctcgtctgcggcagcctcggctgcctgcacctccagggcggcggcgcgACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGc                                                            <  2:47251‑M2/81‑1 (MQ=255)                                                                                   gcgcCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGGCGAATTCCGATGCCCGCAACGGCCTGGTCGTCGGTGCCt                                                          >  1:434663/1‑150 (MQ=255)                                                                                      ccgccgccCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACg                                                       >  1:1272029/1‑150 (MQ=255)                                                                                        gccgccaggcgacgctcgtctgcggcagcctcggctgcctgcacctccagggcggcggcgcgACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATCTCATGTATTCTCGCAACGGCTTGGTCGTAGGTGGTTacgcg                                                     >  2:233989‑M2/63‑148 (MQ=255)                                                                                           gccCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTg                                                                       >  1:1293476/1‑129 (MQ=255)                                                                                           gccCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTg                                                                       <  2:1293476/129‑1 (MQ=255)                                                                                                gcgacgctcgtctgcggcagcctcggctgcctgcacctccagggcggcggcgcgACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCAt                                             <  1:233989‑M2/96‑1 (MQ=255)                                                                                                     tGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCa                                        <  1:1062848/150‑1 (MQ=255)                                                                                                      gcaggcagCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTg                                                  >  2:1174783/1‑139 (MQ=255)                                                                                                      gcaggcagCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTg                                                  <  1:1174783/139‑1 (MQ=255)                                                                                                       caggcagCGGAGTCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCAcc                                      <  2:1012493/150‑1 (MQ=255)                                                                                                          gcagCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACcgac                                   <  1:822351/150‑1 (MQ=255)                                                                                                             gCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCgacgac                                >  2:973601/1‑150 (MQ=255)                                                                                                                     tGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATGCCATCGGTGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGACATGCGCACCGACGACggcgggcg                        >  1:1156934/1‑150 (MQ=255)                                                                                                                        cGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAg                     >  2:1068988/1‑150 (MQ=255)                                                                                                                        cGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAg                     >  2:967708/1‑150 (MQ=255)                                                                                                                         gCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGc                    >  2:1135914/1‑150 (MQ=255)                                                                                                                             ccGAGCCTTGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGc                <  2:1147949/149‑1 (MQ=255)                                                                                                                                 gCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAAc                                                                             >  2:327870/1‑85 (MQ=255)                                                                                                                                 gCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAAc                                                                             <  1:327870/85‑1 (MQ=255)                                                                                                                                   gTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCgg          <  2:491843/150‑1 (MQ=255)                                                                                                                                   gTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCgg          >  1:594842/1‑150 (MQ=255)                                                                                                                                      gCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGgaga       >  1:521926/1‑150 (MQ=255)                                                                                                                                        cTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGGAGATc     <  1:1265481/150‑1 (MQ=255)                                                                                                                                          ggcggcggcGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGGAGATCgg   <  2:521926/150‑1 (MQ=255)                                                                                                                                           gcggcggcgCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGGAGATCGGc  <  1:973601/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                           GGCTGGGCGGTCGGCCATGCCGGCGTGGTCTTGCACAGCCAGGACGGTGGTGAGCACTGGAGCGTGCAGCTCGACGGCAAGCGCGCCGCCGCCCTGGAGGTGCAGGCAGCCGAGGCTGCCGCAGACGAGCGTCGCCTGGCGGCGGCGCAACGGCTGCTGGCCGACGGCGCGGACAAGCCGTTGTTGGCCCTGAATTTCACCGATGCCCGCAACGGCCTGGTCGTCGGTGCCTACGGGGTGGCCATGCGCACCGACGACGGCGGGCGCAGCTGGCAGTCGGAGATCGGC  >  NC_002947/3632854‑3633141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.