New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3665840 | 49 (0.930) | 5 (0.100) | 3/238 | NT | 9.3% | coding (705/957 nt) | PP_3229 | aliphatic sulfonate‑binding protein |
? | NC_002947 | = 3665854 | 50 (0.980) | coding (719/957 nt) | PP_3229 | aliphatic sulfonate‑binding protein |
GCCCAGCGTCAGCAGAACGCACGGATCCTGGTCGACGGCAGCGAACTGGCCAGTTACCAGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3665712‑3665840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCCGGCTTCACGCAATGCCAGGTACACCTGCTGCAATACCTCAGGATGCGCCTTGGCATAATCGCTGCCGGCGAGGTAATAGCGCTGGTAACTGGCCAGTTCGCTGCCGTCGACCAGGATCCGTGCGTTCTGCTGACGCTGGGCGCTGGC < NC_002947/3665854‑3665706 GCCCAGCGTCAGCAGAACGCACGGATCCTGGTCGACGGCAGCGAACTGGCCAGTTACCAGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCAGGCACCGGCTTCACGCAATGCCAGG < 1:1172828/150‑1 AGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCACCGGCTTCACGCAATGCCAGGTACA > 1:1180038/1‑96 AGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCACCGGCTTCACGCAATGCCAGGTACA < 2:1180038/96‑1 AGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCACCGGCTTCACGCAATGCCAGG > 1:1367406/1‑92 AGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCACCGGCTTCACGCAATGCCAGG < 2:1367406/92‑1 ACCGGCTTCACGCAATGCCAGGTACACCTGCTGCAATACCTCAGGATGCGCCTTGGCATAATCGCTGCCGGCGAGGTAATAGCGCTGGTAACTGGCCAGTTCGCTGCCGTCGACCAGGATCCGTGCGTTCTGCTGACGCTGGGCGCTGGC > 1:192877/1‑150 ACCGGCTTCACGCAATGCCAGGTACACCTGCTGCAATACCTCAGGATGCGCCTTGGCATAATCGCTGCCGGCGAGGTAATAGCGCTGGTAACTGGCCAGTTCGCTGCCGTCGACCAGGATCCGTGCGTTCTGCTGACGCTGGGCGCTGGC > 2:523494/1‑150 GCCCAGCGTCAGCAGAACGCACGGATCCTGGTCGACGGCAGCGAACTGGCCAGTTACCAGCGCTATTACCTCGCCGGCAGCGATTATGCCAAGGCGCATCCTGAGGTATTGCAGCAGGTGTACCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3665712‑3665840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCCGGCTTCACGCAATGCCAGGTACACCTGCTGCAATACCTCAGGATGCGCCTTGGCATAATCGCTGCCGGCGAGGTAATAGCGCTGGTAACTGGCCAGTTCGCTGCCGTCGACCAGGATCCGTGCGTTCTGCTGACGCTGGGCGCTGGC < NC_002947/3665854‑3665706 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |