New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3688734 =	57 (1.080)	4 (0.080)	4/234	NT	6.8%	coding (808/1107 nt)	PP_3253	carboxylate‑amine ligase
	?	NC_002947	3688800 =	56 (1.120)					coding (874/1107 nt)	PP_3253	carboxylate‑amine ligase

CGGCGTCCGCGCTGTCTATGGGTATCTGGGCCTGCAGTTGGGCGAGCCAGCCTTGCGCCGTGACCGGCTGCTGCTCGTGACAACCTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3688887‑3688734 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caattcATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGCACGTGCTGCGCCATGGTACCCATGCCGATCAGCAAT  >  NC_002947/3688800‑3688947                                                                                                                                                                                                                                                                                                                CGGCGTCCGCGCTGTCTATGGGTATCTGGGCCTGCAGTTGGGCGAGCCAGCCTTGCGCCGTGACCGGCTGCTGCTCGTGACAACCTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCA                                                                                                                                                          >  2:1290640/1‑150             TGTCTATGGGTATCTGGGCCTGCAGTTGGGCGAGCCAGCCTTGCGCCGTGACCGGCTGCTGCTCGTGACAACCTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTCAgatcgga                                                                                                                                              >  1:305900/1‑143                                                                                  AACCTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAG                                                                         >  1:1142084/1‑150                                                                                     CTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCT                                                                                                              <  1:722379/110‑1                                                                                     CTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCT                                                                                                              >  2:722379/1‑110                                                                                                         CCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCC                                                  <  2:1142084/150‑1                                                                                                                                                      AATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGCACGTGCTGCGCCATGGTACCCATGCCGATCCGC     <  1:1423277/150‑1                                                                                                                                                      AATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGC                                      <  1:842915/117‑1                                                                                                                                                      AATTCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGC                                      >  2:842915/1‑117                                                                                                                                                         TCATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGCACGTGCTGCGCCATGGTACCCATGCCGATCAGCAAT  <  2:838386/150‑1                                                                                                                                                                                                                                                                                                                CGGCGTCCGCGCTGTCTATGGGTATCTGGGCCTGCAGTTGGGCGAGCCAGCCTTGCGCCGTGACCGGCTGCTGCTCGTGACAACCTATGAATTGTGCGTGGCGCCCATGGCGCATGGCACGCCAGTAGTTCTCCTGGGCGATCCAGCGCAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3688887‑3688734 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caattcATAGGTTGTCACGAGCAGCAGCCGGTCACGGCGCAAGGCTGGCTCGCCCAACTGCAGGCCCAGATACCCATAGACAGCGCGGACGCCGAGCGCGCCTGCCAGCACGCCCTGCACGTGCTGCGCCATGGTACCCATGCCGATCAGCAAT  >  NC_002947/3688800‑3688947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.