New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3760723 | 38 (0.720) | 3 (0.060) | 3/232 | NT | 7.8% | coding (28/2091 nt) | PP_3325 | ferric siderophore receptor |
? | NC_002947 | = 3760742 | 35 (0.710) | coding (47/2091 nt) | PP_3325 | ferric siderophore receptor |
ATCCCCTTCGAGCTCGTGGACAGTGCCCAAGTCAGGACGTATCCAACAATGCAACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3760613‑3760723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGAGCTCGAAGGGGATCACAACGGGTACACCATCA < NC_002947/3760742‑3760594 ATCCCCTTCGAGCTCGTGGACAGTGCCCAAGTCAGGACGTATCCAACAATGCAACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGGCCGAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGA < 1:912991/150‑1 AACAATGCAACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGGCCGAACAAGCCCAGCGTCAGGCCGGCC < 1:954490/91‑1 AACAATGCAACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGGCCGAACAAGCCCAGCGTCAGGCCGGCC > 2:954490/1‑91 AACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGG < 1:1341201/56‑1 AACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGG > 2:1341201/1‑56 CCGAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGAGCTCGAAGGGGATCACAACGGGTACACCAT > 1:1414303/1‑150 CGAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGA > 1:841253/1‑119 CGAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGA < 2:841253/119‑1 GAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGAGCTCGAAGGGGATCACAACGGGTACACCATCA > 2:348769/1‑150 ATCCCCTTCGAGCTCGTGGACAGTGCCCAAGTCAGGACGTATCCAACAATGCAACGTTATAGCGTGAAAAACGGAGACTTTACGTGAACCCTCGTGCCCCCCTTCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3760613‑3760723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgAACAAGCCCAGCGTCAGGCCGGCCAGAAGGGGGGCACGAGGGTTCACGTAAAGTCTCCGTTTTTCACGCTATAACGTTGCATTGTTGGATACGTCCTGACTTGGGCACTGTCCACGAGCTCGAAGGGGATCACAACGGGTACACCATCA < NC_002947/3760742‑3760594 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |