| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3796538 | 49 (0.930) | 6 (0.120) | 6/228 | NT | 11.2% | intergenic (‑42/+50) | fcs/vdh | feruloyl‑CoA‑synthetase/vanillin dehydrogenase |
| ? | NC_002947 | = 3796547 | 50 (1.030) | intergenic (‑51/+41) | fcs/vdh | feruloyl‑CoA‑synthetase/vanillin dehydrogenase | |||||
ATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3796381‑3796538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcccCGTCATATCGGGCGGCGGCAGGATGTACAACAAGAACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACG < NC_002947/3796547‑3796400 ATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGC < 1:1407328/150‑1 CACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCC < 2:682479/150‑1 GCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTACCGCCGCCCCGTCATATCGGGCGGCGGCAGGA > 1:142106/1‑104 GCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTACCGCCGCCCCGTCATATCGGGCGGCGGCAGGA < 2:142106/104‑1 CCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCCGTCATATCGGGCGGCGGCA > 1:226887/1‑85 CCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCCGTCATATCGGGCGGCGGCA < 2:226887/85‑1 GCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCCGTCATATCGGGCGGCGGC > 1:579795/1‑75 GCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCCGTCATATCGGGCGGCGGC < 2:579795/75‑1 CCCCGTCATATCGGGCGGCGGCAGGATGTACAACAAGAACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGCTGCAGGTCAGTCAC < 2:353034/150‑1 CCCGTCATATCGGGCGGCGGCAGGATGTACAACAAGAACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACG > 1:150558/1‑150 ATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3796381‑3796538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcccCGTCATATCGGGCGGCGGCAGGATGTACAACAAGAACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACG < NC_002947/3796547‑3796400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |