New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3807585 = | 46 (0.880) | 3 (0.060) | 3/236 | NT | 7.3% | coding (2158/2544 nt) | PP_3364 | two‑component system response regulator |
? | NC_002947 | 3807621 = | 32 (0.630) | coding (2194/2544 nt) | PP_3364 | two‑component system response regulator |
TGCATGGCTTGGTCCTCGGAGCTGGCGGTGATCACGTCCTTGATTTGCGCATCGTTGAGAATTTGCTCCAGGCCTACCGCAATCACCAGTTGATCCTCGAGTATCAGCACACACAAGCCCGAGCGCGCTGCAAACGCACCGTTCGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3807736‑3807585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGC > NC_002947/3807621‑3807730 TGCATGGCTTGGTCCTCGGAGCTGGCGGTGATCACGTCCTTGATTTGCGCATCGTTGAGAATTTGCTCCAGGCCTACCGCAATCACCAGTTGATCCTCGAGTATCAGCACACACAAGCCCGAGCGCGCTGCAAACGCACCGTTCGCACGG < 2:68894/150‑1 CATGGCTTGGTCCTCGGAGCTGGCGGTGATCACGTCCTTGATTTGCGCATCGTTGAGAATTTGCTCCAGGCCTACCGCAATCACCAGTTGATCCTCGAGTATCAGCACACACAAGCCCGAGCGCGCTGCAAACGCACCGTTCGCACGGGC < 2:681727/150‑1 ACAAGCCCGAGCGCGCTGCAAACGCACCGTTCGCACGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGC > 2:934686/1‑150 CGAGCGCGCTGCAAACGCACCGTTCGCACGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGC < 1:1111721/129‑1 CGAGCGCGCTGCAAACGCACCGTTCGCACGGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGC > 2:1111721/1‑129 GGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAA < 1:866514/112‑1 GGGCTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAA > 2:866514/1‑112 TGCATGGCTTGGTCCTCGGAGCTGGCGGTGATCACGTCCTTGATTTGCGCATCGTTGAGAATTTGCTCCAGGCCTACCGCAATCACCAGTTGATCCTCGAGTATCAGCACACACAAGCCCGAGCGCGCTGCAAACGCACCGTTCGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3807736‑3807585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcTTGTGTGTGCTGATACTCGAGGATCAACTGGTGATTGCGGTAGGCCTGGAGCAAATTCTCAACGATGCGCAAATCAAGGACGTGATCACCGCCAGCTCCGAGGACCAAGC > NC_002947/3807621‑3807730 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |