New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3811617 =	44 (0.840)	4 (0.090)	4/220	NT	9.7%	intergenic (‑165/‑103)	PP_3367/PP_3368	hypothetical protein/MFS transporter
	?	NC_002947	3811664 =	35 (0.750)					intergenic (‑212/‑56)	PP_3367/PP_3368	hypothetical protein/MFS transporter

TTCCATCTTGGCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3811776‑3811617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgttgcagccATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGATGTCAGTCCAGGAACACCCCCCGCTCCCCAGTAAAAACACCGTCGCCAAGATGGAAGCCGCCATGGCACTGGGCAGCTTTGCCATC  >  NC_002947/3811664‑3811806                                                                                                                                                                                                                                                                                                                 TTCCATCTTGGCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGA                                                                                                                                                           >  2:1040164/1‑150        TTGGCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACGTCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCA                                                                                                                                                    <  2:953465/150‑1        TTGGCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACGTCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCA                                                                                                                                                    <  2:953561/150‑1           GCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATTGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCAGCC                                                                                                                                                 >  2:757229/1‑150                    TTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGCGGAAGCCGGGGCAGCATCCTCGACGTTGCAGCCATCGATTGA                                                                                                                                        >  1:1351158/1‑150                    TTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGCGGAAGCCGGGGCAGCATCCTCGACGTTGCAGCCATCGATTGA                                                                                                                                        <  2:1351158/150‑1                                                                                                                            TCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGAT                                                                                       >  1:1132678/1‑95                                                                                                                            TCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGAT                                                                                       <  2:1132678/95‑1                                                                                                                                                    CGACGTTGCAGGCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACGGATGTCAGTCCAGGAACACCCCCCGCTCCCCAGTAAAAACACCGTCGCCAAGATGGAAGCCGCCATGGCACTGGGCAGCTTT        <  1:793872/150‑1                                                                                                                                                    CGACGTTGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGATGTCAGTCCAGGAACACCCCCCGCTCCCCAGTAAAAACACCGTCGCCAAGATGGAAGCCGCCATGGCACTGGGCAGCTTT        <  1:1365287/150‑1                                                                                                                                                     GACGTTGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAA                                                                                                    >  1:372714/1‑57                                                                                                                                                     GACGTTGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAA                                                                                                    <  2:372714/57‑1                                                                                                                                                          TGCAGCCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGATGTCAGTCCAGGAACACCCCCCGCTCCCCAGTAAAAACACCGTCGCCAAGATGGAAGCCGCCATGGCACTGGGCAGCTTTGCCATC  <  2:1057768/150‑1                                                                                                                                                               CCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGAT                                                                                       <  1:906853/60‑1                                                                                                                                                               CCATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGAT                                                                                       >  2:906853/1‑60                                                                                                                                                                                                                                                                                                                 TTCCATCTTGGCGACGGTGTTTTTACTGGGGAGCGGGGGGTGTTCCTGGACTGACATCTGTATCCCTATTGAAACATGCTGAAACGTTCAAGGCGGGATAATAGTCAATCGATGGCTGCAACGTCGAGGATGCTGCCCCGGCTTCCGCGACGTTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3811776‑3811617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgttgcagccATCGATTGACTATTATCCCGCCTTGAACGTTTCAGCATGTTTCAATAGGGATACAGATGTCAGTCCAGGAACACCCCCCGCTCCCCAGTAAAAACACCGTCGCCAAGATGGAAGCCGCCATGGCACTGGGCAGCTTTGCCATC  >  NC_002947/3811664‑3811806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.