New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3989550 =	50 (0.950)	3 (0.060)	3/232	NT	5.7%	coding (2024/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	3989597 =	52 (1.050)					coding (2071/2085 nt)	oplA	5‑oxoprolinase A

TCAAGCAGCTCTTGTTATTGTACGAACCGCCCGGCAGCGCAAAACTGCCGGGCGGTTATCAGGCCCATGATCGGCGCGCGCCGACCGCAAGATCAACCCCCGCGTGTCACCCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3989703‑3989550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtgACACGCGGGGGTTGATCTTGCGGTCGGCGCGCGCCGATCATGGGCCTGATAACCGCCCGGCAGTTTTGCGCTGCCGGGCGGTTCGTACAATAACAAGAGCTGCTTGAGTAGCTTGCCTGCAGTTCCTTTTTTCAATGCTGCCCTCT  >  NC_002947/3989597‑3989742                                                                                                                                                                                                                                                                                                              TCAAGCAGCTCTTGTTATTGTACGAACCGCCCGGCAGCGCAAAACTGCCGGGCGGTTATCAGGCCCATGATCGGCGCGACGCATCCTCAAGATCAACCCCCGCGTGTCACCCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCG                                                                                                                                                        >  1:88563/1‑150  CAAGCAGCTCTTGTTATTGTACGAACCGCCCGGCAGTCCAAAACTGCCGGGCGGTTATCAGGCCCATGATCGGCGCGCGCCGACCGCAAGATCAACCCCCGCGTGTCACCCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGG                                                                                                                                                       <  1:1365886/150‑1                                                                                                           TCACCCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGGGTGACACGCGGGGGTTGATCTTGCGGTCGGCGCGCGCCGATCATGGGCCTGATAACCGCCCGGCAGTTTTGCGCTGCCGGGCGGTTCGTACAATAACAAGAGCTG                                              >  1:1353588/1‑150                                                                                                               CCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGGGTGACACGCGGGGGTTGATCT                                                                                                                                  <  1:60311/62‑1                                                                                                               CCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGGGTGACACGCGGGGGTTGATCT                                                                                                                                  >  2:60311/1‑62                                                                                                                                                    CCGGGTGACACGCGGGGGTTGATCTTGCGGTCGGCGCGCGCCGATCATGGGCCTGATAACCGCCCGGCAGTGTTGCGCTGCCGGGCGGTTCGTACAATAACAAGAGCTGCTTGAGTAGCTTGCCTGCAGTTCCTTTTTTCCATTCTGCCC     >  2:148943/1‑150                                                                                                                                                       GGTGACACGCGGGGGTTGATCTTGCGGTCGGCGCGCGCCGATCATGGGCCTGATAACCGCCCGGCAGTTTTGCGCTGCCGGGCGGTTCGTACAATAACAAGAGCTGCTTGAGTAGCTTGCCTGCAGTTCCTTTTTTCAATGCTGCCCTCT  >  1:1024983/1‑150                                                                                                                                                                                                                                                                                                              TCAAGCAGCTCTTGTTATTGTACGAACCGCCCGGCAGCGCAAAACTGCCGGGCGGTTATCAGGCCCATGATCGGCGCGCGCCGACCGCAAGATCAACCCCCGCGTGTCACCCGGTAGGTGGCCGAAGGCTCCAGGCGAGCCTGCCAGCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3989703‑3989550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtgACACGCGGGGGTTGATCTTGCGGTCGGCGCGCGCCGATCATGGGCCTGATAACCGCCCGGCAGTTTTGCGCTGCCGGGCGGTTCGTACAATAACAAGAGCTGCTTGAGTAGCTTGCCTGCAGTTCCTTTTTTCAATGCTGCCCTCT  >  NC_002947/3989597‑3989742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.