New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4278745 | 39 (0.740) | 6 (0.120) | 6/232 | NT | 13.4% | coding (331/339 nt) | PP_3749 | hypothetical protein |
? | NC_002947 | = 4278751 | 41 (0.830) | coding (337/339 nt) | PP_3749 | hypothetical protein |
TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4278595‑4278745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctcAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC < NC_002947/4278751‑4278608 TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCT > 1:1207022/1‑150 TGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCG > 1:1360267/1‑150 CTATATCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATG < 2:1360267/150‑1 TCACCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTG > 2:1419971/1‑150 CCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTC < 1:1348525/82‑1 CCGTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTC > 2:1348525/1‑82 GTCAGCACCGCTCGGCTCTGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATG < 1:1419971/150‑1 CCGCTCAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC > 2:768137/1‑150 TTCGACGCGAACGGGCGGGCCATTTCAGAGCATATGAAAGCTTCGACGGTTGAAGGCGTGCGCATCAAGCGCAACCGCAACGCGCCGGAAGACGAAACCGTGATACGCATTGCCCTGGCAGAAAAAGGCTATATCACCGTCAGCACCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4278595‑4278745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctcAGAGCCGAGCGGTGCTGACGGTGATATAGCCTTTTTCTGCCAGGGCAATGCGTATCACGGTTTCGTCTTCCGGCGCGTTGCGGTTGCGCTTGATGCGCACGCCTTCAACCGTCGAAGCTTTCATATGCTCTGAAATGGCCCGCC < NC_002947/4278751‑4278608 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |