New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4419554	44 (0.840)	4 (0.080)	4/236	NT	9.3%	coding (277/552 nt)	PP_3910	hypothetical protein
	?	NC_002947	= 4419573	36 (0.710)					coding (296/552 nt)	PP_3910	hypothetical protein

TCGCCCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4419401‑4419554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcTCAGCCTTCTCGGCTGCCCGCACCTCTTTGTCTGTGCCCTTGGCATGCTTGGCCGCCCGGCGCAGCGAGCGGTAGCCGTATTCGTCAGGCCGGCACCAGTGCACGTCCAGGTCGCGGCTGGCGCTGAGCTTGATACCGCCGACGTA  <  NC_002947/4419573‑4419428                                                                                                                                                                                                                                                                                                              TCGCCCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAG                                                                                                                                                        <  1:122416/150‑1     CCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGGGGTGC                                                                                                                                                    >  2:421704/1‑150     CCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGC                                                                                                                                                    >  1:1233753/1‑150     CCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGC                                                                                                                                                    >  2:1109723/1‑150                                               TCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATGCGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGGGGTGCTCAGCCTTCTCGGCTGCCCGCACCTCTTTGTCTGTGCCCTTG                                                                                                          <  1:1302635/150‑1                                                                   GACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGCTCAGCCTTCTCGGCTGCCCGCACCTCTTT                                                                                                                       <  1:1000099/117‑1                                                                   GACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGCTCAGCCTTCTCGGCTGCCCGCACCTCTTT                                                                                                                       >  2:1000099/1‑117                                                                                                                                               ACAAAGAGGTGCTCAGCCTTCTCGGCTGCCCGCACCTCTTTGTCTGTGCCCTTGGCATGCTTGGCCGCCCGGCGCAGCGAGCGGTAGCCGTATTCGTCAGGCCGGCACCAGTGCACGTCCAGGTCGCGGCTGGCGCTGAGCTTGATACCG          >  2:208865/1‑150                                                                                                                                                       GTGCTCAGCCTTCTCGGCTGCCCGCACCTCTTTGTCTGTGCCCTTGGCATGCTTGGCCGCCCGGCGCAGCGAGCGGTAGCCGTATTCGTCAGGCCGGCACCATTGCACGTCCAGGTCGCGGCTGGCGCTGAGCTTGATACCGCCGACGTA  >  1:667586/1‑150                                                                                                                                                                                                                                                                                                              TCGCCCATGTACAGCGGATCCCGCAACTACGTCGGCGGTATCAAGCTCAGCGCCAGCCGCGACCTGGACGTGCACTGGTGCCGGCCTGACGAATACGGCTACCGCTCGCTGCGCCGGGCGGCCAAGCATGCCAAGGGCACAGACAAAGAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4419401‑4419554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcTCAGCCTTCTCGGCTGCCCGCACCTCTTTGTCTGTGCCCTTGGCATGCTTGGCCGCCCGGCGCAGCGAGCGGTAGCCGTATTCGTCAGGCCGGCACCAGTGCACGTCCAGGTCGCGGCTGGCGCTGAGCTTGATACCGCCGACGTA  <  NC_002947/4419573‑4419428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.