| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4442308 = | 77 (1.460) | 7 (0.140) | 6/236 | NT | 9.0% | coding (267/1293 nt) | nicP‑II | porin‑like protein |
| ? | NC_002947 | 4442332 = | 67 (1.330) | coding (243/1293 nt) | nicP‑II | porin‑like protein | |||||
CCCGCGCCACGCTGCAGGCGCGCAATTACTTCTTCAGCCGCGACTATGCCGATATCAAGGGCGCCAGCACCCAGTCGCGCACCCAGGAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4442459‑4442308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggtATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCCTGCAGCGTGGCGCGGGCACCTTCGATGAAACCGGCCT > NC_002947/4442332‑4442480 CCCGCTCCACGCTGAAGGGGCGCAATTACTTCTTCAGCCGCGACTATGCCGATATCAAGGGCGCAAGCACCCAGTCGCGCACCCAGTAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTGG < 1:68274/150‑1CCCGCGCCACGCTGCAGGCGCGCAATTACTTCTTCAGCCGCGACTATGCCGATATCAAGGGCGCCAGCACCCAGTCGCGCACCCAGGAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTGG < 2:669122/150‑1 GCCAGCACCCAGTCGCGCACCCAGGAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTG > 1:24899/1‑87 GCCAGCACCCAGTCGCGCACCCAGGAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTG < 2:24899/87‑1 GGTTATACCCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGT < 1:665421/90‑1 GGTTATACCCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGT > 2:665421/1‑90 ATACCCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGG < 1:1187396/84‑1 ATACCCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGG > 2:1187396/1‑84 CCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCCTGCAGCGTGGCGCGGG > 1:613029/1‑150 CCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGG < 1:922620/102‑1 CCAGGGCACCCTTGGCGTGGGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGG > 2:922620/1‑102 GGTATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCCTGCAGCGTGGCGCGGGCACCTTCGATGAAACCGGC < 2:430236/150‑1 TATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCGTGCAGCGTGGCGCGGGCACCTTCGATGAAACCGGCCT < 1:197077/150‑1 TATAAACGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCCTGCAGCGTGGCGCGGGCACCTTCGATGAAACCGGCCT < 2:442072/150‑1 CCCGCGCCACGCTGCAGGCGCGCAATTACTTCTTCAGCCGCGACTATGCCGATATCAAGGGCGCCAGCACCCAGTCGCGCACCCAGGAATGGGCGCAGGGGTTTATCCTCAATGCCAGCTCCGGTTATACCCAGGGCACCCTTGGCGTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4442459‑4442308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggtATAACCGGAGCTGGCATTGAGGATAAACCCCTGCGCCCATTCCTGGGTGCGCGACTGGGTGCTGGCGCCCTTGATATCGGCATAGTCGCGGCTGAAGAAGTAATTGCGCGCCTGCAGCGTGGCGCGGGCACCTTCGATGAAACCGGCCT > NC_002947/4442332‑4442480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |