| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4629929 | 52 (0.990) | 3 (0.060) | 3/228 | NT | 5.1% | coding (143/486 nt) | PP_4094 | hypothetical protein |
| ? | NC_002947 | = 4629978 | 63 (1.290) | coding (192/486 nt) | PP_4094 | hypothetical protein | |||||
ACCATAAAACACATACTTGAGAAATTCAGCAATGACCCGAGAATTGACGTTTTCCCTTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTTGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4629793‑4629929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcggcggTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGCGAGGTCTGGAGGATAGCTAAGGCAGTTGGGTAGTATGGGTAGTGGTGAGTCTGAAGGGAAAACGTCAATTC < NC_002947/4629978‑4629833 ACCATAAAACACATACTTGAGAAATTCAGCAATGACCCGAGAATTGACGTTTTCCCTTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTT < 1:619150/130‑1ACCATAAAACACATACTTGAGAAATTCAGCAATGACCCGAGAATTGACGTTTTCCCTTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTT > 2:619150/1‑130 ACGTTTTCCCTTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTTGCGGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAA < 2:170217/150‑1 TTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTTGCGGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGT < 1:1211114/142‑1 TTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTTGCGGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGT > 2:1211114/1‑142 TTGCGGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGAGAGGTCTGGAGGATAGCTAAGGCAGTT > 1:78245/1‑111 TTGCGGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGAGAGGTCTGGAGGATAGCTAAGGCAGTT < 2:78245/111‑1 GGCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGCGAGGTCTGGAGGATAGCTAAGGCAGTTGGGTAGTATGGGTAGTGGTGAGTCTGAAGGGAAAACGTCAATT > 1:619751/1‑150 GCGGTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGCGAGGTCTGGAGGATAGCTAAGGCAGTTGGGTAGTATGGGTAGTGGTGAGTCTGAAGGGAAAACGTCAATTC > 1:254007/1‑150 ACCATAAAACACATACTTGAGAAATTCAGCAATGACCCGAGAATTGACGTTTTCCCTTCAGACTCACCACTACCCATACTACCCAACTGCCTTAGCTATCCTCCAGACCTCGCTGAATTCTACAAACTTTGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4629793‑4629929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcggcggTAGTATGGTAAAAGAGATGCTTTCGTTTTTTGGGGAAAACAACTGGGCGCCGCCGCAAAGTTTGTAGAATTCAGCGAGGTCTGGAGGATAGCTAAGGCAGTTGGGTAGTATGGGTAGTGGTGAGTCTGAAGGGAAAACGTCAATTC < NC_002947/4629978‑4629833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |