New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4668856 = | 53 (1.010) | 5 (0.100) | 5/240 | NT | 9.2% | coding (682/1533 nt) | nuoM | NADH‑quinone oxidoreductase subunit M |
? | NC_002947 | 4668888 = | 47 (0.920) | coding (714/1533 nt) | nuoM | NADH‑quinone oxidoreductase subunit M |
AGAGCGAAGCGCAGCAGGCCGTAGGCCGCGGTCTTCAGCAAGATACCCGCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4669007‑4668856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCTGGCGGGTATCTTGCTGAAGACCGCGGCCTACGGCCTGCTGCGCTTCGCTCTGCCG > NC_002947/4668888‑4669011 AGAGCGAAGCGCAGCAGGCCGTAGGCCGCGGTCTTCAGCAAGATACCCGCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAG < 2:1121107/150‑1 ACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCTGGCGGGTATCTTGCTGAAGACCGCGGCCTACGGCCTGC > 1:193004/1‑142 ACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCTGGCGGGTATCTTGCTGAAGACCGCGGCCTACGGCCTGC < 2:193004/142‑1 GCAGCTTCACCGCGAAGGCGATGAAGAAGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCT < 1:1415912/100‑1 GCAGCTTCACCGCGAAGGCGATGAAGAAGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCT > 2:1415912/1‑100 TTCACCGCGAAGGCGATGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCTGGCGGGTATCTTGCTGAAGACCGCGGCCTACGGCCTGCTGAGCTTCGCTCTGCCG > 1:652065/1‑150 AGAGCGAAGCGCAGCAGGCCGTAGGCCGCGGTCTTCAGCAAGATACCCGCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4669007‑4668856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGCACCGACCGCAGGCTCGGTGGACCTGGCGGGTATCTTGCTGAAGACCGCGGCCTACGGCCTGCTGCGCTTCGCTCTGCCG > NC_002947/4668888‑4669011 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |