| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4826312 = | 44 (0.840) | 6 (0.120) | 6/236 | NT | 13.2% | coding (4923/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4826345 = | 37 (0.730) | coding (4890/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
GCAACTCATCCCTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4826462‑4826312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGCGCCGGCACCATGTAGGCTGGCAATTGCTCA > NC_002947/4826345‑4826492 aCAACTCATCCCTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTT > 2:978699/2‑150GCAACTCATCCCTTTGGCACAGATGCCATTGGGTCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTT < 2:1042221/150‑1GCAACTCATCCCTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCTATCTGG‑CGCGACGTGTT < 2:1042301/150‑1GCAACTCATCCCTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTT > 2:999612/1‑150 CTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACACGTCGC‑GCCAGATGGCCGCGACCTGTTGTTGCAGCTCG < 2:1166184/150‑1 AAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTT > 1:1277039/1‑95 AAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTT < 2:1277039/95‑1 ACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTT < 1:1166184/150‑1 AGGTCGCGGCCATCTGG‑CGCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGG > 1:314303/1‑77 AGGTCGCGGCCATCTGG‑CGCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGG < 2:314303/77‑1 GCGGCCATCTGG‑CGCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGA > 2:1179498/1‑47 GCGGCCATCTGG‑CGCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGA < 1:1179498/47‑1 TGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGCGCCGGCACCATGTAGGCTGGCAATTGC < 1:1025562/150‑1 TGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGC > 1:376655/1‑123 TGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGC < 2:376655/123‑1 GTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGA > 1:1196599/1‑114 GTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGA < 2:1196599/114‑1 GTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGCGAAGAGTGGCGCCGGCACCATGTAGGCTGGCAATTGCT > 2:336812/1‑150 TGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGCGCCGGCACCATGTAGGCTGGCAATTGCTCA < 2:1303997/150‑1 GCAACTCATCCCTTTGGCACAGATGCCATTGGGCCCCAGCGGCAAGGTCGACCGCAAGGCACTGCCTGCCCCAGTGTGGCAGCAGCGTGAGCATGTCGAGCCACGAACCGAGCTGCAACAACAGGTCGCGGCCATCTGG‑CGCGACGTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4826462‑4826312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGGATGAGTTGCGCCGGCACCATGTAGGCTGGCAATTGCTCA > NC_002947/4826345‑4826492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |