New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4826312 =	44 (0.840)	6 (0.120)	6/236	NT	13.2%	coding (4923/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4826345 =	37 (0.730)					coding (4890/12954 nt)	pvdL	non‑ribosomal peptide synthetase

AAGGCGCCCAGCTCGCTGGCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGG  >  NC_002947/4826163‑4826453                                                                                                                                                      |                                                                                                                                               aaGGCGCCCAGCTCGCTGGCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTc                                                                                                                                                <  1:1019060/150‑1 (MQ=255)  tgagcaattgccagcctacatggtgccggcgcaactcatccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaaca                                                                                                                                               <  2:1303997‑M1/2‑1 (MQ=255)    agcaattgccagcctacatggtgccggcgccactcttcgctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaac                                                                                                                                             >  2:336812‑M1/147‑150 (MQ=255)     gcaattgccagcctacatggtgccggcgcaactcatccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaaca                                                                                                                                            <  1:1025562‑M1/5‑1 (MQ=255)        ccAGCTCGCTGGCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAAGACGt                                                                                                                                         >  2:888076/1‑150 (MQ=255)           gCTCGCTGGCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTcgc                                                                                                                                      <  2:572325/150‑1 (MQ=255)                  ggCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGAt                                                                                                                              <  1:962243/150‑1 (MQ=255)                     ttCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGc                                                                                                                           <  1:197472/150‑1 (MQ=255)                              ggCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGGAGCCAAGCGAGTAACATCCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCtg                                                                                                                  >  2:1118997/1‑150 (MQ=255)                              ggCCTAGAGCAGCAGCGCGACATCGCATGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCtg                                                                                                                  >  2:1380469/1‑150 (MQ=255)                               gCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCtgt                                                                                                                 <  2:217877/150‑1 (MQ=255)                               gCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTCACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCtgt                                                                                                                 <  1:585894/150‑1 (MQ=255)                                gcaactcatccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaaca                                                                                                                                            <  2:376655‑M1/5‑1 (MQ=255)                                gcaactcatccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaaca                                                                                                                                            >  1:376655‑M1/119‑123 (MQ=255)                                ccTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGACGTAGCCCTGCATGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCtgtt                                                                                                                >  2:549996/1‑150 (MQ=255)                                  ttGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGAc                                                                                                                     <  1:1025286/143‑1 (MQ=255)                                  ttGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGAc                                                                                                                     >  2:1025286/1‑143 (MQ=255)                                  aactcatccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaaCAACACGTCGCG‑CCAGATGGCCGCGACCtgttgt                                                                                                              <  1:1166184‑M1/34‑1 (MQ=255)                                    gAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGttgttg                                                                                                            <  2:203290/150‑1 (MQ=255)                                        tccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaac                                                                                                                                             >  1:1196599‑M1/111‑114 (MQ=255)                                        tccctttggcacagatgccattgggccccagcggcaaggtcgaccgcaaggcactgcctgccccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaacaac                                                                                                                                             <  2:1196599‑M1/4‑1 (MQ=255)                                                          gCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACa                                                                                      >  1:429753/1‑150 (MQ=255)                                                             tGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGc                                                                                   >  1:13107/1‑150 (MQ=255)                                                                  ggTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACg                                                                              <  2:13107/150‑1 (MQ=255)                                                                       gcgAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACgctgct                                                                         >  1:473027/1‑150 (MQ=255)                                                                       gcgAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACgctgct                                                                         >  1:978699/1‑150 (MQ=255)                                                                           aaCGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCca                                                                     <  1:205243/150‑1 (MQ=255)                                                                              gATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCacac                                                                  >  2:977744/1‑150 (MQ=255)                                                                                   gggTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTgggg                                                             <  2:429753/150‑1 (MQ=255)                                                                                      tAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTggg                                                              <  2:608620/146‑1 (MQ=255)                                                                                      tAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTggg                                                              >  1:608620/1‑146 (MQ=255)                                                                                        gCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTgttgtt                                                                                                             <  2:426308/97‑1 (MQ=255)                                                                                        gCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTgttgtt                                                                                                             >  1:426308/1‑97 (MQ=255)                                                                                          cAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGgcaggcag                                                      >  2:1025562/1‑150 (MQ=255)                                                                                             gatctaGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACCTGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGc                                                   <  1:1182143/145‑1 (MQ=255)                                                                                              aaCGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGcc                                                  >  1:999612/1‑150 (MQ=255)                                                                                                   gTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCg                                             <  2:172933/150‑1 (MQ=255)                                                                                                   gTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGAAATGCTCGCTCTTCTGCCACACTGGGGCAGGCAGTGccagatc                                             >  2:1182143/1‑145 (MQ=255)                                                                                                      ccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaaCAACACGTCGCG‑CCAGATGGCCGCGACCt                                                                                                                   <  2:314303‑M1/29‑1 (MQ=255)                                                                                                      ccagtgtggcagcagcgtgagcatgtcgagccacgaaccgagctgcaaCAACACGTCGCG‑CCAGATGGCCGCGACCt                                                                                                                   >  1:314303‑M1/49‑77 (MQ=255)                                                                                                      accaccGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTc                                          >  2:862432/1‑150 (MQ=255)                                                                                                      accaccGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTc                                          <  1:1196207/150‑1 (MQ=255)                                                                                                                     gaagTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCttcc                           <  1:1118997/150‑4 (MQ=255)                                                                                                                           gtcCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCaa                     >  1:233435/1‑150 (MQ=255)                                                                                                                            tcCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTgg                            <  1:327628/142‑1 (MQ=255)                                                                                                                            tcCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTgg                            >  2:327628/1‑142 (MQ=255)                                                                                                                            tcCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAAt                    >  2:615672/1‑150 (MQ=255)                                                                                                                             ccTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGAGGTCGACCTTGCCGCTGGGGCCCAATg                   <  1:549996/150‑1 (MQ=255)                                                                                                                               tcgagccacgaaccgagctgcaaCAACACGTCGCG‑CCAGATGGCcgc                                                                                                                        <  1:1179498‑M1/24‑1 (MQ=255)                                                                                                                               tcgagccacgaaccgagctgcaaCAACACGTCGCG‑CCAGATGGCcgc                                                                                                                        >  2:1179498‑M1/24‑47 (MQ=255)                                                                                                                               tGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCCCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTGGACCTTGCCGCTGGGGCCCAATGGc                 >  1:1265758/1‑150 (MQ=255)                                                                                                                                     ccAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCtgt           <  2:233435/150‑1 (MQ=255)                                                                                                                                       aaTGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCacagatgc         >  1:77365/1‑143 (MQ=255)                                                                                                                                         tGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCg                                             <  2:316596/112‑1 (MQ=255)                                                                                                                                         tGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCg                                             >  1:316596/1‑112 (MQ=255)                                                                                                                                            cgagctgcaaCAACAGGTCGCGGCCATCTGGC‑GCGACGTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAg    <  2:1166184‑M1/140‑1 (MQ=255)                                                                                                                                             cgGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAgg   >  2:1166484/1‑150 (MQ=255)                                                                                                                                              ggCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAggg  >  1:191353/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                               AAGGCGCCCAGCTCGCTGGCTTCGAACAGGGCCTTGAGCGGCAGCTCGACATCGCAGGCCTGGCGGGTGCGCGAAACGATCTGGGTAGCCAGCAACGAGTGACCACCGAGGGCGAAGAAGTCGTCCTGCAGGCCAATGCGCGGCAGATTCAACACGTCGCG‑CCAGATGGCCGCGACCTGTTGTTGCAGCTCGGTTCGTGGCTCGACATGCTCACGCTGCTGCCACACTGGGGCAGGCAGTGCCTTGCGGTCGACCTTGCCGCTGGGGCCCAATGGCATCTGTGCCAAAGGG  >  NC_002947/4826163‑4826453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.