New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 488964052 (0.990)7 (0.170) 7/192 NT 12.3% intergenic (+41/‑112) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 = 4889677 59 (1.440)intergenic (+78/‑75) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase

GGCGAGATCAACTACCGCTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4889465‑4889640
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggctcgcccgcgaaGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCTTGTACTCCGCGC  <  NC_002947/4889677‑4889529
                                                                                                                                                                                                                                                                                                                                      
GGCGAGATCAACTACCGCTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGAC                                                                                                                                                                                 >  2:548932/1‑150
   GAGATCAACTACCGCTTCCTGTTCGAA‑ACCTAGCACTTCTGTCCCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCT                                                                                                                                                                              <  2:824962/150‑1
     GATCAACTACCGCTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGT                                                                                                                                                                            <  2:39694/150‑1
      ATCAACTACCGCTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTG                                                                                                                                                                           >  1:864481/1‑150
              CCGATTCCTGTTCGAACACCT‑GGACCGGATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGG                                                                                                                                                                   <  2:226208/150‑1
                 CTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTC                                                                                                                                                                <  1:548932/150‑1
                      TGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCG                                                                                                                                                           >  2:650897/1‑150
                      TGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCG                                                                                                                                                           >  1:327715/1‑150
                                                                        GTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGG                                                                                                          <  1:650897/150‑1
                                                                            AAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACTCAATCTGAGGAACAACTCGGGACCCTG                                                                                                                                                                             <  1:399188/79‑1
                                                                            AAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTC                                                                                                                                                                >  2:1313168/1‑92
                                                                            AAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTC                                                                                                                                                                <  1:1313168/92‑1
                                                                            AAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTG                                                                                                                                                                             >  2:399188/1‑79
                                                                                          CACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGG                                                                                        >  1:266431/1‑150
                                                                                          CACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGG                                                                                        <  2:266431/150‑1
                                                                                           ACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGG                                                                                                                                                                    >  1:785922/1‑73
                                                                                           ACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGG                                                                                                                                                                    <  2:785922/73‑1
                                                                                             CGAAGCGGGCCTGGGCTGGCTTAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGC                                                                                                         >  2:915779/1‑130
                                                                                             CGAAGCGGGCCTGGGCTGGCTTAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGC                                                                                                         <  1:915779/130‑1
                                                                                                                         CACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGG                                                                                                           <  2:32965/100‑1
                                                                                                                         CACAACGCAATCTGAGGAACAACGCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGG                                                                                                           >  1:32965/1‑100
                                                                                                                                                       CCTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTG                           <  1:1207373/150‑1
                                                                                                                                                        CTGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGG                          >  2:1192859/1‑150
                                                                                                                                                         gGTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCACACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGT                         <  1:809935/149‑1
                                                                                                                                                         atctGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGT                         <  1:513741/146‑1
                                                                                                                                                          GTGGGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTG                        <  2:284662/150‑1
                                                                                                                                                             ttcGCGGGCGAGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTC                     >  1:916177/4‑150
                                                                                                                                                             GGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTC                     >  2:16780/1‑150
                                                                                                                                                             GGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTC                                                                          <  2:1121897/97‑1
                                                                                                                                                             GGAGCGGGCTCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTC                                                                          >  1:1121897/1‑97
                                                                                                                                                                    GCTCGCCCGCGAAGCAGACAGCTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCT              <  2:908963/150‑1
                                                                                                                                                                      TCGCCCGCGAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCTTG            >  2:903274/1‑150
                                                                                                                                                                              GAAGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCTTGTACTCCGC    <  1:1147934/150‑1
                                                                                                                                                                                AGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCTTGTACTCCGCGC  <  1:1192859/150‑1
                                                                                                                                                                                                                                                                                                                                      
GGCGAGATCAACTACCGCTTCCTGTTCGAACACCT‑GGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4889465‑4889640
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggctcgcccgcgaaGCAGACAACTCGGTGGATGGCACCGGCTTTGCCGGTGTTCGCGGGCGAGCCCGCTCCCACAGGGTCCCGAGTTGTTCCTCAGATTGCGTTGTGGGTTTTCAGCCAGCCCAGGCCCGCTTCGGTGGTGGTCAGCGGCTTGTACTCCGCGC  <  NC_002947/4889677‑4889529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.