New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 488964052 (0.990)7 (0.170) 7/192 NT 12.3% intergenic (+41/‑112) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 = 4889677 59 (1.440)intergenic (+78/‑75) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase

AACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGG  >  NC_002947/4889493‑4889789
                                                                                                                                                   |                                                                                                                                                     
aaCACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAaca                                                                                                                                                     >  2:822743/1‑150 (MQ=255)
     cTGGACCGCATTGGCTACCAGGGCTGGTTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGc                                                                                                                                                >  1:903274/1‑150 (MQ=255)
     cTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGc                                                                                                                                                >  1:376219/1‑150 (MQ=255)
     cTGGACCGCATTCGATACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGc                                                                                                                                                >  2:916177/1‑150 (MQ=255)
        gACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCGGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCaaa                                                                                                                                             >  2:84583/1‑150 (MQ=255)
             cATTGGCTACCAGGGCTGGGTGGGAGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCgg                                                                                                                                        <  2:344692/150‑1 (MQ=255)
                       cAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAc                                                                                                                              <  2:376219/150‑1 (MQ=255)
                        aGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAcc                                                                                                                             >  1:16780/1‑150 (MQ=255)
                          ggCTGGGTGGGCGCGGAGTACAAGCCGCTGCGCTCCACCGAAGCGGGCGTGGGCTGGTGGATAACCCACAACGGAATCTGAGGTGCACCTCGGGATCCTGTGGGAGCGGGCTCGCACGCGAACACCGGTAACGCCGGTGCCAACCACCGa                                                                                                                           <  2:657530/150‑1 (MQ=255)
                                    gcgcGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCt                                                                                                                 <  1:1192859‑M2/150‑2 (MQ=255)
                                      gcgGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttc                                                                                                               <  1:1147934‑M2/150‑4 (MQ=255)
                                           gTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcggg                                                                                                          <  1:650897‑M1/150‑46 (MQ=255)
                                              cAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcga                                                                                                       >  2:903274‑M2/1‑139 (MQ=255)
                                                aGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGCTGTCTGCttcgcgggcgagc                                                                                                     <  2:908963‑M2/150‑14 (MQ=255)
                                                       gACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggctcgcccgcgaa                                                                                              >  1:916177‑M2/1‑130 (MQ=255)
                                                       gACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcc                                                                                              >  2:16780‑M2/1‑130 (MQ=255)
                                                          caccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccac                                                                                           <  2:284662‑M2/150‑24 (MQ=255)
                                                           accaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGTGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacc                                                                                          <  1:809935‑M2/150‑25 (MQ=255)
                                                           accaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctccagat                                                                                          <  1:513741‑M2/150‑25 (MQ=255)
                                                            ccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacag                                                                                         >  2:1192859‑M2/1‑125 (MQ=255)
                                                             caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagg                                                                                        >  1:266431‑M1/1‑87 (MQ=255)
                                                             caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagg                                                                                        <  2:266431‑M1/150‑64 (MQ=255)
                                                             caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGtt                                                                                                                        <  1:164876/118‑1 (MQ=255)
                                                             caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGtt                                                                                                                        >  2:164876/1‑118 (MQ=255)
                                                             caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagg                                                                                        <  1:1207373‑M2/150‑27 (MQ=255)
                                                                cGAAGCGGGCCTGGGCTGGCTTAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggc                                                                                                         <  1:915779‑M1/130‑47 (MQ=255)
                                                                cGAAGCGGGCCTGGGCTGGCTTAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggc                                                                                                         >  2:915779‑M1/1‑84 (MQ=255)
                                                                 gAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                                                       <  1:904511/99‑1 (MQ=255)
                                                                 gAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                                                       >  2:904511/1‑99 (MQ=255)
                                                                       ggCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgc                                                                              >  2:1029792/1‑150 (MQ=255)
                                                                         ccTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgctt                                                                            <  2:1004371/150‑1 (MQ=255)
                                                                         ccTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgctt                                                                            >  1:1004371/1‑150 (MQ=255)
                                                                          cTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                                                           <  2:1147934/150‑1 (MQ=255)
                                                                          cTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                                                           <  1:284662/150‑1 (MQ=255)
                                                                               ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCCCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga                                                                      <  1:667268/150‑1 (MQ=255)
                                                                                 ggctgAAAACCCACAACGCAATCTGAGGAACAAGTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACCCCGGCAAAGCCGGTGCCAACCACCGAGTTGCCTGCTTCCCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                                                    <  1:767445/150‑1 (MQ=255)
                                                                                   ctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGc                                                                                    <  2:1122585/132‑1 (MQ=255)
                                                                                   ctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGc                                                                                    >  1:1122585/1‑132 (MQ=255)
                                                                                    tgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGatat                                                                 >  2:1349274/1‑150 (MQ=255)
                                                                                     gAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATc                                                                >  1:619187/1‑150 (MQ=255)
                                                                                        aaCCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgctt                                                                            >  2:1200840/1‑135 (MQ=255)
                                                                                        aaCCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgctt                                                                            <  1:1200840/135‑1 (MQ=255)
                                                                                           tcacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAAtt                                                          >  2:796805/2‑150 (MQ=255)
                                                                                           ccACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAAtt                                                          >  1:1073692/1‑150 (MQ=255)
                                                                                            cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgg                                                                                                           <  2:32965‑M1/100‑45 (MQ=255)
                                                                                            cacaACGCAATCTGAGGAACAACGCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgg                                                                                                           >  1:32965‑M1/1‑56 (MQ=255)
                                                                                                   cAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAagag                                                  <  2:327715/150‑1 (MQ=255)
                                                                                                   cAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAagag                                                  <  2:619187/150‑1 (MQ=255)
                                                                                                      tCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                                                           <  2:254287/122‑1 (MQ=255)
                                                                                                      tCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                                                           >  1:254287/1‑122 (MQ=255)
                                                                                                        tGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAAt                                             <  2:1207373/150‑1 (MQ=255)
                                                                                                        ggAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAAt                                             <  1:4346/149‑1 (MQ=255)
                                                                                                            gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcc                                                                                              >  1:1121897‑M2/1‑77 (MQ=255)
                                                                                                            gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcc                                                                                              <  2:1121897‑M2/97‑21 (MQ=255)
                                                                                                            gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACaaa                                                     >  1:268474/1‑138 (MQ=255)
                                                                                                            gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACaaa                                                     <  2:268474/138‑1 (MQ=255)
                                                                                                                       gACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                                                     >  1:1080195/1‑95 (MQ=255)
                                                                                                                       gACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                                                     <  2:1080195/95‑1 (MQ=255)
                                                                                                                          ccTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtg                           <  1:1207373‑M1/150‑125 (MQ=255)
                                                                                                                          ccTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtg                           >  1:266431‑M2/1‑63 (MQ=255)
                                                                                                                          ccTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtg                           <  2:266431‑M2/150‑88 (MQ=255)
                                                                                                                          ccTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAagag                                                  <  1:1398607/127‑1 (MQ=255)
                                                                                                                          ccTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACACGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAagag                                                  >  2:1398607/1‑127 (MQ=255)
                                                                                                                           cTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtgg                          >  2:1192859‑M1/1‑25 (MQ=255)
                                                                                                                            tgtgGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGt                         <  1:1029792/150‑1 (MQ=255)
                                                                                                                            tgtgGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGt                         >  1:848885/1‑150 (MQ=255)
                                                                                                                            ggtggGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcacacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggt                         <  1:809935‑M1/149‑127 (MQ=255)
                                                                                                                            ggtgGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGt                         <  1:822743/149‑1 (MQ=255)
                                                                                                                            atctggagcgGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggt                         <  1:513741‑M1/146‑127 (MQ=255)
                                                                                                                             gtgGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtg                        <  2:284662‑M1/150‑128 (MQ=255)
                                                                                                                              tgGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTaa                                              >  1:402557/1‑127 (MQ=255)
                                                                                                                              tgGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTaa                                              <  2:402557/127‑1 (MQ=255)
                                                                                                                                ttcgcggGCGAGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtc                     >  1:916177‑M1/4‑20 (MQ=255)
                                                                                                                                ttcgCGGGCGAGCCCGCGAACACCGGCAAAGCCGGGGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCa                     >  1:941023/4‑150 (MQ=255)
                                                                                                                                ggAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtc                     >  2:16780‑M1/1‑20 (MQ=255)
                                                                                                                                ggAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttc                                                                          >  1:1121897‑M1/1‑20 (MQ=255)
                                                                                                                                ggAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttc                                                                          <  2:1121897‑M1/97‑78 (MQ=255)
                                                                                                                                 tcgCGGGCGAGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGAGGCCAAAGCTTGCTTGAGATATCACACTTACAGAGAGGTAATTTCTCATGGCTAACATCGGTTTCAt                    >  1:654284/3‑150 (MQ=38)
                                                                                                                                   gCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAgg                                                 <  2:1321645/119‑1 (MQ=255)
                                                                                                                                   gCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAgg                                                 >  1:1321645/1‑119 (MQ=255)
                                                                                                                                       gCTCGCCCGCGAAgcagacagctcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggct              <  2:908963‑M1/150‑138 (MQ=255)
                                                                                                                                       gCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgct                                                                             <  1:1234848/87‑1 (MQ=255)
                                                                                                                                       gCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgct                                                                             >  2:1234848/1‑87 (MQ=255)
                                                                                                                                       gCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCAc              <  1:1349274/150‑1 (MQ=255)
                                                                                                                                         tCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggcttg            >  2:903274‑M1/1‑11 (MQ=255)
                                                                                                                                           gCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttaagccagcccaggcccgcttcg                              <  1:915779‑M2/130‑85 (MQ=255)
                                                                                                                                           gCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttaagccagcccaggcccgcttcg                              >  2:915779‑M2/1‑46 (MQ=255)
                                                                                                                                            cccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggcttgtac         <  1:650897‑M2/150‑106 (MQ=255)
                                                                                                                                             ccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgcgttgttcctcagattgcgttgtg                                                          >  1:32965‑M2/1‑44 (MQ=255)
                                                                                                                                             ccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtg                                                          <  2:32965‑M2/100‑57 (MQ=255)
                                                                                                                                             ccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGcat        >  1:3994/1‑150 (MQ=255)
                                                                                                                                                cgAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGcatcat     <  1:84583/150‑1 (MQ=255)
                                                                                                                                                 gAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggcttgtactccgc    <  1:1147934‑M1/150‑148 (MQ=255)
                                                                                                                                                 gAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATg    <  2:848885/150‑1 (MQ=255)
                                                                                                                                                   agcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggcttgtactccgcgc  <  1:1192859‑M1/150‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
AACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGG  >  NC_002947/4889493‑4889789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.