New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5035285	0 (0.000)	8 (0.150)	6/246	NT	100%	coding (1277/1536 nt)	PP_4439	transposase
	?	NC_002947	= 5038211	NA (NA)					coding (1255/1536 nt)	PP_4443	transposase

AAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGC‑TGACGCGCTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5035153‑5035285 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  <  NC_002947/5038211‑5038083                                                                                                                                                                                                                                                                         AAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTAGGTAGCGCGTCA‑GCGCTACCCAGCGTTTCAGGCTGTAa                                                                                                                  <  1:188342/150‑2                                                                                                              CTGGGTAGCGC‑TGACGCGCTACCTAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCC     >  2:1063051/1‑150                                                                                                               TGGGTAGCGC‑TGACGCGCTACCTAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGA                                                                                           <  1:829910/63‑1                                                                                                               TGGGTAGCGC‑TGACGCGCTACCTAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGA                                                                                           >  2:829910/1‑63                                                                                                               TGGGTAGCGC‑TGACGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCA    >  1:1297287/1‑150                                                                                                                 GGTAGCGC‑TGACGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCCGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  >  2:986043/1‑150                                                                                                                  GTAGCGC‑TGACGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATG                                                 >  1:117094/1‑102                                                                                                                  GTAGCGC‑TGACGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATG                                                 <  2:117094/102‑1                                                                                                                                                                                                                                                                         AAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGC‑TGACGCGCTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5035153‑5035285 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTCGCCAAC  <  NC_002947/5038211‑5038083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.