| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5091068 = | 54 (1.030) | 4 (0.080) | 4/234 | NT | 7.6% | intergenic (‑84/+64) | astA‑II/astC | arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase |
| ? | NC_002947 | 5091116 = | 46 (0.920) | intergenic (‑132/+16) | astA‑II/astC | arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase | |||||
CCACACTGACCAAAGGCTGATCCGCCAGCGGTCCTTTCGCCGGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5091151‑5091068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCTTC > NC_002947/5091116‑5091263 CCACACTGACCAAAGGCTGATCCGCCAGCGGTCCTTTCGCCGGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGA > 1:147004/1‑84CCACACTGACCAAAGGCTGATCCGCCAGCGGTCCTTTCGCCGGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGA < 2:147004/84‑1 GGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGC < 1:1158531/80‑1 GGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGC > 2:1158531/1‑80 GCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTT < 1:466463/126‑1 GCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTT > 2:466463/1‑126 GCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCT > 1:211817/1‑150 GAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCTTC < 1:934912/150‑1 CCACACTGACCAAAGGCTGATCCGCCAGCGGTCCTTTCGCCGGCCCTGGCGCAGCCTCAGCCCGAGGCTGATCCGGGTCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5091151‑5091068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCTTC > NC_002947/5091116‑5091263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |