New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5091068 = | 54 (1.030) | 4 (0.080) | 4/234 | NT | 7.6% | intergenic (‑84/+64) | astA‑II/astC | arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase |
? | NC_002947 | 5091116 = | 46 (0.920) | intergenic (‑132/+16) | astA‑II/astC | arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase |
GGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCTTC > NC_002947/5090968‑5091263 | gggCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGaaa < 1:601013/150‑1 (MQ=255) gggCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGaaa < 1:867782/150‑1 (MQ=255) gcgcgcATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGAACGGAAAAAAGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATAGCCGACACGGATCAGCCTCGGGCTGAGGCTGCGGCAGGGACGGCGaaa > 2:606878/3‑150 (MQ=255) cgcATCACCAGCATGGTGTCACTCCTTTAGACTACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGa < 1:147625/150‑1 (MQ=255) cACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCt < 1:61705/150‑1 (MQ=255) aCCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGAc < 2:1259452/145‑1 (MQ=255) aCCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGAc > 1:1259452/1‑145 (MQ=255) aCTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCttt > 2:370189/1‑150 (MQ=255) aCTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCttt < 2:129592/150‑1 (MQ=255) cTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTg < 1:159285/150‑1 (MQ=255) cTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTg < 1:326758/150‑1 (MQ=255) tCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTgg > 2:74735/1‑150 (MQ=255) aaTACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGtgtg < 2:309356/150‑1 (MQ=255) aaTACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGtgtg < 2:123655/150‑1 (MQ=255) tACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGc < 2:898606/150‑1 (MQ=255) gggCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCcac > 2:956202/1‑150 (MQ=255) ggCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCcaca < 1:956202/150‑1 (MQ=255) cACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGtt < 1:261402/150‑1 (MQ=255) aCGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTc > 2:500348/1‑150 (MQ=255) aCGGAAAAACGGCAGGCACCCAGGCACGGGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGt > 1:903094/1‑150 (MQ=255) aCGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGt > 2:1070164/1‑150 (MQ=255) aaaCGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGc < 2:1265324/150‑1 (MQ=255) aaaCGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGc > 1:954820/1‑150 (MQ=255) aaCGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGaa < 2:1371078/87‑1 (MQ=255) aaCGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGaa > 1:1371078/1‑87 (MQ=255) aCGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCt > 1:1318978/1‑150 (MQ=255) caggcacccaggcaccTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTtcgt < 2:1168639/150‑1 (MQ=255) gcacccaggcaccTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGa < 1:1233372/150‑1 (MQ=255) cacccaggcaccTGCACTGGAATCGGGTATCGCCGACCCGTATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGAt < 1:74735/150‑1 (MQ=255) acccaggcaccTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATg > 2:181697/1‑150 (MQ=255) aggcaccTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCgg > 2:888504/1‑150 (MQ=255) accTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGtt > 1:315600/1‑116 (MQ=255) accTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGtt < 2:315600/116‑1 (MQ=255) cTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCtt < 1:888504/150‑1 (MQ=255) aCTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAac > 2:1198017/1‑150 (MQ=255) ggAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAaccac < 1:1406575/150‑1 (MQ=255) gAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAaccacc > 2:1310888/1‑150 (MQ=255) tCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAgg > 1:820736/1‑150 (MQ=255) ggTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCtt > 1:1300999/1‑150 (MQ=255) ggTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCtt > 1:754794/1‑150 (MQ=255) tATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTgg < 1:1070164/150‑1 (MQ=255) aTCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGgc < 1:370189/150‑1 (MQ=255) TCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTgg < 2:147004‑M1/84‑1 (MQ=255) TCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTgg > 1:147004‑M1/1‑84 (MQ=255) ggccctggcgcagcctcagcccgaggctgatccgggtcggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGc < 1:1158531‑M2/37‑1 (MQ=255) ggccctggcgcagcctcagcccgaggctgatccgggtcggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGc > 2:1158531‑M2/44‑80 (MQ=255) gccctggcgcagcctcagcccgaggctgatccgggtcggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCtt > 2:466463‑M2/43‑126 (MQ=255) gccctggcgcagcctcagcccgaggctgatccgggtcggcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCtt < 1:466463‑M2/84‑1 (MQ=255) ccGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAACGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCgg > 1:874431/1‑150 (MQ=255) cGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAgg > 2:817496/1‑101 (MQ=255) cGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAgg < 1:817496/101‑1 (MQ=255) gcAGCCTCAGCCCGAGGCTGCGCCAGGACCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAACGGACCAc > 2:477217/2‑150 (MQ=255) ccTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTcc > 1:1341347/1‑150 (MQ=255) cGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCggg < 1:500348/150‑1 (MQ=255) gCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTgc > 2:189179/1‑150 (MQ=255) gcCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGa < 1:1148819/125‑1 (MQ=255) gcCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGa > 2:1148819/1‑125 (MQ=255) ccAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCAcc > 1:453536/1‑150 (MQ=255) aGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCAt > 2:1171337/1‑150 (MQ=255) gcgaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCct > 1:211817‑M2/5‑150 (MQ=255) gaAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCcttc < 1:934912‑M2/148‑1 (MQ=255) | GGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGACCCGGATCAGCCTCGGGCTGAGGCTGCGCCAGGGCCGGCGAAAGGACCGCTGGCGGATCAGCCTTTGGTCAGTGTGGCCACAGCGCGTTCGAAGCGGTCCAGGCCTTCGTCGATGTCGGCGTCTTCAACCACCAGGCTTGGCGCGAAGCGGACCACGTCCGGGCCGGCCTGCAGCACCATCACGCCTTC > NC_002947/5090968‑5091263 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |