New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5130870 | 48 (0.910) | 3 (0.060) | 3/236 | NT | 5.7% | coding (582/2148 nt) | recQ | ATP‑dependent DNA 3'‑5' helicase |
? | NC_002947 | = 5130890 | 53 (1.050) | coding (562/2148 nt) | recQ | ATP‑dependent DNA 3'‑5' helicase |
GCGGTTTCGTCGACCTTCTTGCGCGACAGGCAGTAGACGATGCCAGCGTTGCCACGACGTTCGCCGAGGAAGGCCATCAACTGCTTGCGCGGTGCCTCCTTGGGCACGATGCGGTAAAAGATGTTGGGCCGGTCGAAACTCGACAGGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5130718‑5130870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgc‑CTGCACCTGCAAGGCGCCGAGCGCTTCCTGTCGAGTTTCGACCGGCCCAACATCTTTTACCGCATCGTGCCCAAGGAGGCACCGCGCAAGCAGTTGATGGCCTTCCTCGGCGAACGTCGTGGCAACGCTGGCATCGTCTACTGCCTGTC < NC_002947/5130890‑5130742 GCGGTTTCGTCGACCTTCTTGCGCGACAAGCAGTAGACGATGCCAGCGTTGCCACGACGTTCGCCGAGGAAGGCCATCAACTGCTTGCGCGGTGCCTCCTTGGGCACGATGCGGTAAAAGATGTTGGGCCGGTCGAAACTCGACAGGAAG < 1:1047414/150‑1 TCCTTGGGCACGATGCGGTAAAAGATGTTGGGCCGGTCGAAACTCGACAGGAAGCGC‑CTGCACCTGCAAGGCGCCGAGC > 1:899696/1‑79 TCCTTGGGCACGATGCGGTAAAAGATGTTGGGCCGGTCGAAACTCGACAGGAAGCGC‑CTGCACCTGCAAGGCGCCGAGC < 2:899696/79‑1 ATGTTGGGCCGGTCGAAACTCGACAGGAAGCGCTCGGCGCCTTGCAGGTGCAG‑GCGCTTCCTGTCGAGTTTCGACCGGCCCAACATCTTTTACCGCATCGTGCCCAAGGAGGCACCGCGCAAGCAGTTGATGGCCTTCCTCGGCGAACGT > 2:164264/1‑150 C‑CTGCACCTGCAAGGCGCCGAGCGCTTCCTGTCGAGTTTCGACCGGCCCAACATCTTTTACCGCATCGTGCCCAAGGAGGCACCGCGCAAGCAGTTGATGGCCTTCCTCGGCGAACGTCGTGGCAACGCTGGCATCGTCTACTGCCTGTC > 2:1117813/1‑150 GCGGTTTCGTCGACCTTCTTGCGCGACAGGCAGTAGACGATGCCAGCGTTGCCACGACGTTCGCCGAGGAAGGCCATCAACTGCTTGCGCGGTGCCTCCTTGGGCACGATGCGGTAAAAGATGTTGGGCCGGTCGAAACTCGACAGGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5130718‑5130870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgc‑CTGCACCTGCAAGGCGCCGAGCGCTTCCTGTCGAGTTTCGACCGGCCCAACATCTTTTACCGCATCGTGCCCAAGGAGGCACCGCGCAAGCAGTTGATGGCCTTCCTCGGCGAACGTCGTGGCAACGCTGGCATCGTCTACTGCCTGTC < NC_002947/5130890‑5130742 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |