| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5255633 | 47 (0.890) | 4 (0.080) | 4/232 | NT | 8.2% | coding (115/738 nt) | folM | bifunctional dihydrofolate reductase/dihydromonapterin reductase |
| ? | NC_002947 | = 5255654 | 45 (0.910) | coding (136/738 nt) | folM | bifunctional dihydrofolate reductase/dihydromonapterin reductase | |||||
AACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5255499‑5255633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcacTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGG < NC_002947/5255654‑5255572 AACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGG > 1:177417/1‑132AACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGG < 2:177417/132‑1 AGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGG > 1:331487/1‑121 AGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGG < 2:331487/121‑1 TCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGCCTGTGCCCGT < 1:1424533/150‑1 CGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTT < 1:768343/150‑1 TATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTG < 1:867734/112‑1 TATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTG > 2:867734/1‑112 TGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTG > 1:1368228/1‑107 TGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTG < 2:1368228/107‑1 CCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGC < 1:453134/79‑1 CCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGC > 2:453134/1‑79 TGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGG > 1:666531/1‑89 TGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGG < 2:666531/89‑1 AACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5255499‑5255633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcacTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGG < NC_002947/5255654‑5255572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |