| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5255633 | 47 (0.890) | 4 (0.080) | 4/232 | NT | 8.2% | coding (115/738 nt) | folM | bifunctional dihydrofolate reductase/dihydromonapterin reductase |
| ? | NC_002947 | = 5255654 | 45 (0.910) | coding (136/738 nt) | folM | bifunctional dihydrofolate reductase/dihydromonapterin reductase | |||||
CCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTAC > NC_002947/5255493‑5255780 | ccaTACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAggccggcc < 1:1396354/150‑1 (MQ=255) acaGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggt < 2:43205/150‑1 (MQ=255) caGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggtg < 2:875765/150‑1 (MQ=255) gggAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggtggt < 1:965180/150‑1 (MQ=255) ggAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTc < 1:251567/150‑1 (MQ=255) tCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACtgaccaccgtatggccggcctgtgcccgt < 1:1424533‑M1/150‑30 (MQ=255) cGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACtgaccaccgtatggccggcctgtgccagtt < 1:768343‑M1/150‑31 (MQ=255) gCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCAt > 1:669547/1‑150 (MQ=255) tGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggt > 1:1203465/1‑127 (MQ=255) tGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggt < 2:1203465/127‑1 (MQ=255) aaCCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcag > 2:458507/1‑150 (MQ=255) cAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcaggca > 2:75390/1‑150 (MQ=255) aGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGcc < 2:1381792/150‑1 (MQ=255) agacaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCAccc > 1:710594/1‑150 (MQ=255) acaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCa > 1:695340/1‑150 (MQ=255) aaGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAAc > 2:255765/1‑150 (MQ=255) aaGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAAc > 1:1078921/1‑150 (MQ=255) aaGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAACATCCAGCCGCAGGCAGCCCAcc > 1:1299770/1‑145 (MQ=255) aaGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAACATCCAGCCGCAGGCAGCCCAcc < 2:1299770/145‑1 (MQ=255) aGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTAGGGCTGGCCCTGGCCCGCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACa > 1:1242334/1‑150 (MQ=255) gTTGAACACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACAt > 1:1416806/1‑150 (MQ=255) ccaccCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGc > 1:1180649/1‑150 (MQ=255) caccCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAg < 2:8333/82‑1 (MQ=255) caccCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAg > 1:8333/1‑82 (MQ=255) caccCCGAACATGAACAGCCCCATTCTAGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCa > 1:106765/1‑150 (MQ=255) cccGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGtt > 2:1333373/1‑150 (MQ=255) gAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCa < 1:75390/150‑1 (MQ=255) aaCATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAg < 1:1400701/150‑1 (MQ=255) aCATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAga < 2:684142/150‑2 (MQ=255) ccccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgcca < 2:666531‑M2/89‑7 (MQ=255) ccccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgcca > 1:666531‑M2/1‑83 (MQ=255) ccccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCtgtg > 1:731990/1‑150 (MQ=255) cccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGc > 2:620203/1‑150 (MQ=255) ccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACtgaccaccgtatggccggc > 2:453134‑M1/1‑60 (MQ=255) ccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACtgaccaccgtatggccggc < 1:453134‑M1/79‑20 (MQ=255) aTTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggtggt < 2:25870/77‑1 (MQ=255) aTTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACggtggt > 1:25870/1‑77 (MQ=255) tcGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAggcgg > 1:1381401/1‑150 (MQ=255) gccagccaGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGTcgcccgcctg < 2:106765/150‑3 (MQ=255) gccagccaGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAg > 2:750090/1‑150 (MQ=255) gccagccaGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAg < 2:731990/150‑1 (MQ=255) ccagccagCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGTCGCCCGCCTgg < 1:1333373/150‑1 (MQ=255) gcgcGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTgat < 2:1381401/150‑1 (MQ=255) gcgcGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTgat < 1:750090/150‑1 (MQ=255) gctggCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGAAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTgatcgatc > 1:1237074/4‑150 (MQ=255) ggCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAg < 2:1357836/104‑1 (MQ=255) ggCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAg > 1:1357836/1‑104 (MQ=255) ctggccctggccCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTg > 2:875399/1‑150 (MQ=255) ggccctggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCa < 1:255765/150‑1 (MQ=255) gccctggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCg < 1:825622/125‑1 (MQ=255) gccctggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGACCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCg > 2:825622/1‑125 (MQ=255) ggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCATCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCg < 1:805684/150‑1 (MQ=255) cctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTa > 1:249723/1‑150 (MQ=255) ctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCACGCGGGCGACAGCCAGGCGCTGAGCGATCACCTGCACGATCGTTAt > 2:1225690/1‑150 (MQ=255) aaCTGGCACAGGCCGGCCATACGGTGGTCAgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatggggctgttcatgttcggggtggtcaacttgtctgtcctttggttgccacccagcatacccg < 1:768343‑M2/150‑121 (MQ=255) aCGGGCACAGGCCGGCCATACGGTGGTCAgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatggggctgttcatgttcggggtggtcaacttgtctgtcctttggttgccacccagcatacccga < 1:1424533‑M2/150‑122 (MQ=255) cTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGTAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCAAAGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGa < 1:1098484/150‑1 (MQ=255) tGGCACtgaccaccgtatggccggcctgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatgggg < 2:666531‑M1/89‑84 (MQ=255) tGGCACtgaccaccgtatggccggcctgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatgggg > 1:666531‑M1/1‑6 (MQ=255) cacaGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTAc < 1:875399/150‑1 (MQ=255) acaGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCttat > 1:59519/1‑114 (MQ=255) acaGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTtat < 2:59519/117‑1 (MQ=255) | CCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAGGCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTAC > NC_002947/5255493‑5255780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |