| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5350525 = | 38 (0.720) | 12 (0.240) | 12/234 | NT | 22.4% | intergenic (+14/+68) | PP_4704/PP_4705 | hypothetical protein/glyoxalase |
| ? | NC_002947 | 5350566 = | 47 (0.940) | intergenic (+55/+27) | PP_4704/PP_4705 | hypothetical protein/glyoxalase | |||||
GCACGCAGCTTCCACCTGCTGGACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5350679‑5350525‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGGCCGGTCGAGCAAG > NC_002947/5350566‑5350713 GCACGCAGCTTCCACCTGCTGGACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGG > 1:1396755/1‑150 CAGCTTCCACCTGCTGGACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGC < 1:851214/150‑1 CACCTGCTGGACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCAGGCCCGCCCCCACAGG‑CCTGCGCA‑CTACCTGTGGGAGCGGGCGTGCCCG < 2:731720/150‑1 ACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCCCCCACAGG‑CCTGCGCACT‑ACCTGTGGGAGCGGGCGTGCCC < 1:705306/139‑1 ACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCCCCCACAGG‑CCTGCGCACT‑ACCTGTGGGAGCGGGCGTGCCC > 2:705306/1‑139 ACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCCCCCACAGG‑CCTGCGCACT‑ACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCA > 1:903558/1‑118 TGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAAACAACCGCTGCCCCGACACCGCCGGGT > 2:903558/1‑118 ACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGC > 2:782840/1‑150 TCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCG > 2:1249711/1‑150 CCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGC < 1:451920/120‑1 CCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGC > 2:451920/1‑120 CACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGG > 1:363118/1‑122 CACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGG < 2:363118/122‑1 GTAGTGCGCA‑G‑GCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACC > 2:731697/1‑150 GGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGGCCGGTCGAGCAA > 1:65291/1‑150 GGCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCGGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGGCCGGTCGAGCAA > 2:1155530/1‑150 GCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGGCCGGTCGAGCAAG < 2:33114/150‑1 GCGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGACCGGTCGAGCAAG < 2:66760/150‑1 GCACGCAGCTTCCACCTGCTGGACCCGGCCGGGAACAAGGTTCAACCGCTGTATCACCCGGCGGTGTCGGGGCAGCGGTTGGTTTGAAGCCCGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGCGCA‑G‑GCCTGTGGGGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5350679‑5350525‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcGTGCCCGCGAAGAGGCCAGCACGGGCTTCAAACCAACCGCTGCCCCGACACCGCCGGGTGATACAGCGGTTGAACCTTGTTCCCGGCCGGGTCCAGCAGGTGGAAGCTGCGTGCGCCGTCACCATGGTTGAACGGCCGGTCGAGCAAG > NC_002947/5350566‑5350713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |