| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5414380 = | 37 (0.700) | 11 (0.210) | 9/246 | NT | 26.2% | intergenic (‑163/+53) | PP_4755/gabP‑V | ferrichrome‑iron receptor/gamma‑aminobutyrate permease |
| ? | NC_002947 | 5414412 = | 25 (0.480) | intergenic (‑195/+21) | PP_4755/gabP‑V | ferrichrome‑iron receptor/gamma‑aminobutyrate permease | |||||
TGTAAGGCAAAGGGCGCCCGAGGATGGGTGCCCTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5414417‑5414380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTCACTTCCGCCCG > NC_002947/5414412‑5414540 TGTAAGGCAAAGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGC > 1:1271127/1‑142TGTAAGGCAAAGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGC < 2:1271127/142‑1 GCAAAGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCAT > 1:635887/1‑88 GCAAAGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCAT < 2:635887/88‑1 GCAAAGGGCGCCCGAGGATGGGTGCCCTTTGCCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTC > 2:898052/1‑150 GCAAAGGGCGCCCGAGGATGGGTGCCCTTTGCCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGA > 1:526839/1‑90 GCAAAGGGCGCCCGAGGATGGGTGCCCTTTGCCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGA < 2:526839/90‑1 CAAAGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGGGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTCA > 2:631199/1‑150 AGGGCGCCCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTCACTT > 2:1271793/1‑150 GGCGCCCGAGGATGGGGGCCCTTTGCCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTCACTTCC > 1:1342174/1‑150 CCGAGGATGGGTGCCCTTTGTCTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGGTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAACCGGCGATCGCCAGGCCCAATGTCGAGCTCACTTCCGCCCG > 1:1143245/1‑150 TGTAAGGCAAAGGGCGCCCGAGGATGGGTGCCCTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5414417‑5414380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTACAGCCAGGTGAACTGAATCACCCCATCGATCGCGCTGCCACCGGTTGCGCATGACCCCTCGACGTCACGATCCCCAGGAAGGAAATCACGATCGCCAGGCCCAATGTCGAGCTCACTTCCGCCCG > NC_002947/5414412‑5414540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |